PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV98972 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 319aa MW: 36600.4 Da PI: 6.642 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3.1e-15 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ G g+W+ Iar g+ R++k+c++rw +yl OIV98972 18 KGLWSPEEDEKLIRHMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYL 65 678*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5e-16 | 71 | 115 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++ +lG++ W++Ia+++ +Rt++++k++w++ OIV98972 71 RGAFSPQEEDLIIQLHSLLGNR-WSKIAAHLS-RRTDNEIKNFWNST 115 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MRKPDMMGKD NIKSKLRKGL WSPEEDEKLI RHMLTNGQGC WSDIARNAGL LRCGKSCRLR 60 WINYLRPDLK RGAFSPQEED LIIQLHSLLG NRWSKIAAHL SRRTDNEIKN FWNSTLKKKM 120 KMNTSTTSPN NSNESYEPND ILGGIMPINE HDLITMCMDC STSTSSSSMQ SMVSADQFDP 180 FSMLIKNNHY DMTNVSAGFH EIAPCMNQVG MVERHHGNYG ILEPNNKMGL LEREFSLPTL 240 ESRNIEENSA LIDVKSHNNH FTNSCFNNIN RIQSSKVEDL FGFGNHGHRV ENLTMGEWDL 300 ECLMQDIFSF PFLDFQVDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08500.1 | 8e-62 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV98972 |