PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98721

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 490aa MW: 52593.6 Da PI: 7.8251

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98721	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47.4	3.5e-15	312	357	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq OIV98721 312 HNQSERKRRDKINQRMKTLQKLVPNS-----SKSDKASMLDEVIEYLKQLQ 357 9**********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MSQCVPSWDV DENNPPPPRL SLRSNSNSTA TDVPMLDYEV AELTWENGQP SMHGLGLPRH 60 PGKPSTASAA TTTTASRYTW EKPRAGGTLE SIVNQATNLP HHGKLLFDGV GGGGGGDGSN 120 VYGNMLAPWL APHGASAVAT ASNTVTMDAL VPCSKLTEEH GTQVMDSNIN PGIGGCMVGS 180 STHVRPRSGA AITTADQSAI LAAATKRARM TRVSAVASRD QSVSGSATFG RDSQHLTLDT 240 CDREFDLGFT STSMGSPENT SSAKQCTKNT VDDHDSVCHS RPMRDDGDEE EKKKGIGKSS 300 VCTKRSRAAA IHNQSERKRR DKINQRMKTL QKLVPNSSKS DKASMLDEVI EYLKQLQAQL 360 QMMNRINMSS MMLPMAMQQQ LQMSMMAGPM GMGMGMGMGM NIPGMDMNTM NRSNIPGMPP 420 LLHPSAFMPM PSWDGGGGDR VQGPPPPVMP DPSMFPFFGC QAQPMNMDAY SRIAAMYQQM 480 HQPPPSGSKN

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MSQCVPSWDV DENNPPPPRL SLRSNSNSTA TDVPMLDYEV AELTWENGQP SMHGLGLPRH  60
PGKPSTASAA TTTTASRYTW EKPRAGGTLE SIVNQATNLP HHGKLLFDGV GGGGGGDGSN  120
VYGNMLAPWL APHGASAVAT ASNTVTMDAL VPCSKLTEEH GTQVMDSNIN PGIGGCMVGS  180
STHVRPRSGA AITTADQSAI LAAATKRARM TRVSAVASRD QSVSGSATFG RDSQHLTLDT  240
CDREFDLGFT STSMGSPENT SSAKQCTKNT VDDHDSVCHS RPMRDDGDEE EKKKGIGKSS  300
VCTKRSRAAA IHNQSERKRR DKINQRMKTL QKLVPNSSKS DKASMLDEVI EYLKQLQAQL  360
QMMNRINMSS MMLPMAMQQQ LQMSMMAGPM GMGMGMGMGM NIPGMDMNTM NRSNIPGMPP  420
LLHPSAFMPM PSWDGGGGDR VQGPPPPVMP DPSMFPFFGC QAQPMNMDAY SRIAAMYQQM  480
HQPPPSGSKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	321	ERKRRD
2	317	322	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	3e-81	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIV98721