PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98684

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 543aa MW: 59386.5 Da PI: 6.986

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98684	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.1	3.6e-09	359	406	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OIV98684 359 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 406 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MWQSSSSSNA IDVQAIMNNC PSTQDCFYKW DKSNDQNLQF DSALSSMVSS PAASNSNMSS 60 DNFVIRELIG KLGNIGASAY NDEISPHSQS HPFAATSYAN NNNNNTNNNN STNTSCYSTP 120 LSSPPKMNNN NNINNNNNHL VKPMMGLNSS TVAEFLADPG FAERAAKFSC FGSRSFNDRT 180 TQLGLKNNDE LAQRSSLLME NGKLSRVSST PSLKVLGIGS QMGIQDNKNS SMEVATSQEE 240 STISEQTMNG DNGFIKPCSY VNSRKRKGSS KGKAKESSTL INHAMGLSLH GGEASEDSNV 300 KRYKANNGNE NGTLKEEKES KEGASIGVDE KQNKSNSKPP EPPKDYIHVR ARRGQATDSH 360 SLAERVRREK ISERMKLLQD LVPGCNKVTG KALMLDEIIN YVQSLQRQVE FLSMKLATVN 420 TRLDFNIESL ISKDVYQSND SFPLDSSAES FYGQQQPQNS AIYNNIPNGT LSHSSVDPLD 480 TTTLCQNIAM HLPSLNGFSE GASQCPIAFS EEDLQTIVQM GFGQTSNRKS PQSQSFNGTK 540 LKQ

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MWQSSSSSNA IDVQAIMNNC PSTQDCFYKW DKSNDQNLQF DSALSSMVSS PAASNSNMSS  60
DNFVIRELIG KLGNIGASAY NDEISPHSQS HPFAATSYAN NNNNNTNNNN STNTSCYSTP  120
LSSPPKMNNN NNINNNNNHL VKPMMGLNSS TVAEFLADPG FAERAAKFSC FGSRSFNDRT  180
TQLGLKNNDE LAQRSSLLME NGKLSRVSST PSLKVLGIGS QMGIQDNKNS SMEVATSQEE  240
STISEQTMNG DNGFIKPCSY VNSRKRKGSS KGKAKESSTL INHAMGLSLH GGEASEDSNV  300
KRYKANNGNE NGTLKEEKES KEGASIGVDE KQNKSNSKPP EPPKDYIHVR ARRGQATDSH  360
SLAERVRREK ISERMKLLQD LVPGCNKVTG KALMLDEIIN YVQSLQRQVE FLSMKLATVN  420
TRLDFNIESL ISKDVYQSND SFPLDSSAES FYGQQQPQNS AIYNNIPNGT LSHSSVDPLD  480
TTTLCQNIAM HLPSLNGFSE GASQCPIAFS EEDLQTIVQM GFGQTSNRKS PQSQSFNGTK  540
LKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	7e-68	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIV98684