PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV98628
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 682aa    MW: 76058.5 Da    PI: 5.8873
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV98628genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.13.4e-23117217198
               EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
               f kvlt sd++++g +++ +k+a+e+     +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++el+v+v
  OIV98628 117 FSKVLTASDTSTHGGFSVLRKHATEClpaldMSQSTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RADNGELRVGV 215
               88****************************9555555669************************************************..34889999998 PP

               E- CS
        B3  97 fr 98 
                r
  OIV98628 216 KR 217
               65 PP
2Auxin_resp93.34e-31243324183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha++t++ F v+Y+Pr+  s+F+++v+k+++a+k+k+ vG Rfkm+fe++ds+e  +r+sGt+vgv+d++p +W nSkWrsLk
    OIV98628 243 ASHAVATQTLFLVYYKPRT--SQFIISVNKYLEAVKHKFDVGLRFKMRFEGDDSPEsdKRFSGTIVGVEDISP-QWINSKWRSLK 324
                 789***************6..9*******************************98733678**********99.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    
MMLNHSEDDD MLYEQLWKAC AGPHVDVPHV GQRVFYFPQG HMEQLEASTN QELNQRIPLF  60
NLPTKILCRV INVNLLAESE TDEVYAQITL VPESNQAEPT IPDPCPAEVP RPTIHSFSKV  120
LTASDTSTHG GFSVLRKHAT ECLPALDMSQ STPTQELVAR DLHGYEWRFK HIFRGQPRRH  180
LLTTGWSTFV TSKRLVAGDT FVFLRADNGE LRVGVKRLAP QQSSMPSSVI SSQSMHLGVL  240
ATASHAVATQ TLFLVYYKPR TSQFIISVNK YLEAVKHKFD VGLRFKMRFE GDDSPESDKR  300
FSGTIVGVED ISPQWINSKW RSLKVQWDES ASVPRPDRIS PWEIDPLLAS VPAPSAQLVV  360
VKNKRPRPPS EIPDLVDTTG AASAFWNAGM TPPNLQFSAM GESKRSENNH MWHHKQIDNS  420
KSGCNAISRN QADGIWQSSP HSSVPSNLFY DTTDDSKSVS AWPNSKTHSE KLNNDNLRDQ  480
VDKENKVEGA TSCRLFGIEL IGHTKNSPAI DGASVHAENV SGVSNEGCVS TLSKTDADHN  540
SDLSKVSEER NQEQLQVSPK ETQSKQICSR SCTKVQMQGI AVGRAVDLTM LDGYDQLIDE  600
LEKMFDIKGQ LQLRNKWEIV FTDDEGDMML VGDDPWPEFC NMVKRIFICS SQDVKKMSSG  660
SKLPLSSSTE DEIVLSSDTT ET
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1364368KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein