PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIV98616 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 26923.4 Da PI: 6.6712 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 5 | 50 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd l+++++q+G g W++++ g++R++k+c++rw++yl OIV98616 5 AWTEEEDHMLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.6 | 3.8e-15 | 56 | 100 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ +eE e +++++++lG++ W++Ia +++ gRt++++k++w+ + OIV98616 56 RGSFAEEEVEMIIKLHRLLGNR-WSLIAGRLP-GRTANDVKNYWNCH 100 78999*****************.*********.***********977 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
MGGVAWTEEE DHMLKKCIEQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIKRGSFA 60 EEEVEMIIKL HRLLGNRWSL IAGRLPGRTA NDVKNYWNCH LSKKLNALEA KNTKMNRNIE 120 SIRPNQPRII IGSSSLKRRS LQSESSTEQG TQQQESAISS LTFDPERESH ILEPQQENMY 180 SCLDQQGIID ELPMDFKYEG VDAMNSGVGS SSSTNQWDWD DLLLDMDLYN GFSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G66370.1 | 3e-58 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIV98616 |