PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98596

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 308aa MW: 34870 Da PI: 8.6693

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98596	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.2	3.3e-07	29	73	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT++E +l+ +a + + ++ +W ++a++++ g+t +++ + OIV98596 29 QWTPQENKLFENALAFYDKDspdRWLRVAAMIP-GKTVADVIKQYK 73 5******************************.****998876 PP
2	Myb_DNA-binding	47.3	4.7e-15	144	188	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W+ I+r++ ++Rt+ q+ s+ qky OIV98596 144 PWTEEEHRLFLLGLKKYGKGDWRNISRKFVTTRTPTQVASHAQKY 188 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MNRGIEVLSL ASHLQNSNWL FQESKGGAQW TPQENKLFEN ALAFYDKDSP DRWLRVAAMI 60 PGKTVADVIK QYKELEEDVS VIEAGLIPVP GYSTSSFTLE GIEVDNHGFD GFEQFEQFEQ 120 FYSVGGKRGA STRPSEQERK KGVPWTEEEH RLFLLGLKKY GKGDWRNISR KFVTTRTPTQ 180 VASHAQKYFI RQLTGGKDKR RSSIHDITMV NLSETKSPSS DSDRPHSPDH SANAANQQQN 240 QKLSSMIKQE YDWNLPYKSM PMVFNSTNGN KFDAPMLGIS SYGLKQQEHS LLRGTLHGGQ 300 FGPYNTIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	1e-100	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV98596