PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98390

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HB-PHD

Protein Properties

Length: 708aa MW: 81138.1 Da PI: 8.5984

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98390	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	36.4	8.7e-12	489	533	9	53
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++ +e L ++F++n ps+++re L+k+lgL+ ++V WF+N R+ OIV98390 489 HDAVEKLRQVFAQNELPSRSMREALSKELGLDFAKVNKWFKNARY 533 67899***************************************8 PP
2	PHD	38.8	2.1e-13	228	283	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C+ + e++++lCdg C+++fH+ Cl+++l++e++p + w+C+ C++k OIV98390 228 FCANCKLreAFPENDIILCDGsCNRAFHQRCLDPPLDTENIPPEdqGWFCKFCECK 283 699999954455******55***************99999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MRGPRKCSHS KERTESKLDS SSRFDANNTK GRAKKNRLKS KLDKHRVGTN TSRMEVNNSS 60 IEGPIKDYSN KNLIIGQNLC KTDGKSSQMQ SSMMLHGKKA PLCSRNKGED IDREAKIHKM 120 KRRRKTKRRR DNVDLDDASR LQRRTRNLLI RMKQEQNLID AYSGEGWKGQ SREKIRPEKE 180 LQRATKQILK CKLSIRDAIR QLDSLSSVGS IEGSVIAPDG SVYHEHIFCA NCKLREAFPE 240 NDIILCDGSC NRAFHQRCLD PPLDTENIPP EDQGWFCKFC ECKIEILEAT NAHLGTQFSL 300 DITWQDVFKE EATLPDGDNA ILNQEEELPS DDPDDDDYNP ERREDSLSTN VKGTDDNASF 360 DSSSFASAWS LNSECSLVDE DIFREYCSVN SCIDSDDSGK IVCGHRKRKA VDYKKLHDEM 420 FGKDAPLFEQ VSEDEDWGPG KRKRREKESD AANTLMTLHE IENKYSNNDS IREGSSDRHN 480 KRPCFRIPHD AVEKLRQVFA QNELPSRSMR EALSKELGLD FAKVNKWFKN ARYTALKTRK 540 CQSEGEQLKS FTSKASKDFK SQNVEKDELL RSKASKISAV HCQKNGKNVA GREKIKSCRI 600 PLQERRQEKS NKILSKNENG DKDNEFSDDV CLKKLLKEKK RRVNSIYEGD FHAAELEFER 660 LSKVKYKLDS IKQRLSEVQN CRVKGSDESC SNESSVTYVP IAELREKV

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MRGPRKCSHS KERTESKLDS SSRFDANNTK GRAKKNRLKS KLDKHRVGTN TSRMEVNNSS  60
IEGPIKDYSN KNLIIGQNLC KTDGKSSQMQ SSMMLHGKKA PLCSRNKGED IDREAKIHKM  120
KRRRKTKRRR DNVDLDDASR LQRRTRNLLI RMKQEQNLID AYSGEGWKGQ SREKIRPEKE  180
LQRATKQILK CKLSIRDAIR QLDSLSSVGS IEGSVIAPDG SVYHEHIFCA NCKLREAFPE  240
NDIILCDGSC NRAFHQRCLD PPLDTENIPP EDQGWFCKFC ECKIEILEAT NAHLGTQFSL  300
DITWQDVFKE EATLPDGDNA ILNQEEELPS DDPDDDDYNP ERREDSLSTN VKGTDDNASF  360
DSSSFASAWS LNSECSLVDE DIFREYCSVN SCIDSDDSGK IVCGHRKRKA VDYKKLHDEM  420
FGKDAPLFEQ VSEDEDWGPG KRKRREKESD AANTLMTLHE IENKYSNNDS IREGSSDRHN  480
KRPCFRIPHD AVEKLRQVFA QNELPSRSMR EALSKELGLD FAKVNKWFKN ARYTALKTRK  540
CQSEGEQLKS FTSKASKDFK SQNVEKDELL RSKASKISAV HCQKNGKNVA GREKIKSCRI  600
PLQERRQEKS NKILSKNENG DKDNEFSDDV CLKKLLKEKK RRVNSIYEGD FHAAELEFER  660
LSKVKYKLDS IKQRLSEVQN CRVKGSDESC SNESSVTYVP IAELREKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	127	RRRKTK
2	122	131	RRRKTKRRRD
3	124	133	RRRKTKRRRD
4	442	447	RKRREK
5	636	642	LKEKKRR
6	639	667	KKRRVNSIYEGDFHAAELEFERLSKVKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29940.1	1e-148	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	OIV98390