PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98051

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 720aa MW: 79999 Da PI: 4.3783

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98051	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.2e-11	557	600	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+W++++ el+++a++q+G++ ++ I ++ Rt+ q+k+++ k OIV98051 557 RGKWSKQDTELFYEAIRQFGTD-FSMIQLLFP-DRTRHQIKLKYKK 600 89******************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MDPFDDILPV APARGSKFMP KAKLKQPPRK ETSVSDHAIP SKDGEKEQAV LSSASRNTEG 60 ISQDECHNAV ASTLNASAEE SPNLCHSPQV EPPNLEDDTK SEMGNPPQVS AERDTSVLVD 120 DPSSVITMSE VDADWNFTDH TKSACEVESM DFELHPFSNV LPDPGAKNAQ KFLPKIKPRP 180 RVVTTPDIAS HSNVMIEKSD ELPTSCANEV QSFKPSDDGS SGLNQSTNLP LPVSEDNGSF 240 EEVIPPQLDS PDAMLSEVAN HNGETADIFC GLESLDDFLT HAATDTDPTS EIPVHEEPTN 300 AADSPTLADF LRADVSGEKE DASERREDGL SSPSLSKEKR SSIAVEKDKG SNSSRQLRKH 360 ASRRPANNPA NGDVDNDDDI DPPYNPNRDE LEDNDDEFEV DGSSKKERPA SSSKKKSAPK 420 NGKTSRKRKK ANDDLEKATE QPRKKFSHST RRKKRCVDKA LLEIPEDELD PLTLPIKDII 480 LLAEYRERLA KKEASTSKTP PTKQSGGDSH HEAAYNNEEE MLGSEDDRDP DDVEARESIP 540 TAASLFNYQS FMDKAPRGKW SKQDTELFYE AIRQFGTDFS MIQLLFPDRT RHQIKLKYKK 600 EERQHPLELS DAVSSRTKDH SHFKRLIEQL QQASTKAEDQ DQCRDASDFM TGNEVEDLTP 660 ETNNEVGKTE PEANAEDQED ANFKDQEEAN VKEQEDSAAF NSPEPDDDDE DDFSWYKSAV

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MDPFDDILPV APARGSKFMP KAKLKQPPRK ETSVSDHAIP SKDGEKEQAV LSSASRNTEG  60
ISQDECHNAV ASTLNASAEE SPNLCHSPQV EPPNLEDDTK SEMGNPPQVS AERDTSVLVD  120
DPSSVITMSE VDADWNFTDH TKSACEVESM DFELHPFSNV LPDPGAKNAQ KFLPKIKPRP  180
RVVTTPDIAS HSNVMIEKSD ELPTSCANEV QSFKPSDDGS SGLNQSTNLP LPVSEDNGSF  240
EEVIPPQLDS PDAMLSEVAN HNGETADIFC GLESLDDFLT HAATDTDPTS EIPVHEEPTN  300
AADSPTLADF LRADVSGEKE DASERREDGL SSPSLSKEKR SSIAVEKDKG SNSSRQLRKH  360
ASRRPANNPA NGDVDNDDDI DPPYNPNRDE LEDNDDEFEV DGSSKKERPA SSSKKKSAPK  420
NGKTSRKRKK ANDDLEKATE QPRKKFSHST RRKKRCVDKA LLEIPEDELD PLTLPIKDII  480
LLAEYRERLA KKEASTSKTP PTKQSGGDSH HEAAYNNEEE MLGSEDDRDP DDVEARESIP  540
TAASLFNYQS FMDKAPRGKW SKQDTELFYE AIRQFGTDFS MIQLLFPDRT RHQIKLKYKK  600
EERQHPLELS DAVSSRTKDH SHFKRLIEQL QQASTKAEDQ DQCRDASDFM TGNEVEDLTP  660
ETNNEVGKTE PEANAEDQED ANFKDQEEAN VKEQEDSAAF NSPEPDDDDE DDFSWYKSAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	414	430	KKKSAPKNGKTSRKRKK
2	426	430	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-43	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV98051