PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97890

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 344aa MW: 38655.2 Da PI: 6.3376

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97890	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l++ ++++G g+W++ ++ g++R++k+c++rw +yl OIV97890 14 KGPWTSEEDQKLIQHIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.1	3.1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E++ +++++ lG++ W++Ia ++ gRt++++k++w+++l OIV97890 67 RGKFSQDEEQTILHLHSILGNK-WSAIATNLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGRSPCCDEN GLKKGPWTSE EDQKLIQHIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQDEEQTILH LHSILGNKWS AIATNLPGRT DNEIKNFWNT HLRKKLIQMG 120 FDPMTHQPRN DLVSTLPYLL ALVNMTDIMD HNQSLDEHAL RLQAEAVQLA KFQYLHYLLQ 180 SSNSSSTNSY DQNVITNMET SFTMLNSMKE NQVMELPQLC NDNPAPSFHQ GIIAASSSQP 240 LYHQSNMVSD FLDPQVSFNS QSCLNNEQGQ GTNYAIISQG DHTISDHDSS WIIPSPAPSS 300 INPPNATSNV PGDASSRTSS YGGGISSYWP ELFFEDPIIM HELS

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGRSPCCDEN GLKKGPWTSE EDQKLIQHIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SQDEEQTILH LHSILGNKWS AIATNLPGRT DNEIKNFWNT HLRKKLIQMG  120
FDPMTHQPRN DLVSTLPYLL ALVNMTDIMD HNQSLDEHAL RLQAEAVQLA KFQYLHYLLQ  180
SSNSSSTNSY DQNVITNMET SFTMLNSMKE NQVMELPQLC NDNPAPSFHQ GIIAASSSQP  240
LYHQSNMVSD FLDPQVSFNS QSCLNNEQGQ GTNYAIISQG DHTISDHDSS WIIPSPAPSS  300
INPPNATSNV PGDASSRTSS YGGGISSYWP ELFFEDPIIM HELS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	2e-99	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV97890