PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97794

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 963aa MW: 106920 Da PI: 4.8639

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97794	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.2	7.7e-13	18	56	9	48
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 de+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l OIV97794 18 DEILCKAVERFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 56 9********************9.**********986 PP
2	Myb_DNA-binding	65.6	8.9e-21	62	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++d+v+++G++ W++Ia++++ gR +kqc++rw+++l OIV97794 62 KGPWSKEEDEIIIDLVNKYGPKKWSSIAQHLP-GRIGKQCRERWHNHL 108 79****************************.***********97 PP
3	Myb_DNA-binding	46.4	8.9e-15	114	156	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT++E++ l+ a++++G++ W+ ++++ gR+++ +k++w+ OIV97794 114 KEAWTQDEELALIVAHEKYGNR-WAELTKYLP-GRSDNAIKNHWH 156 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 963 aa Download sequence
MLKSIVLRSG INGLSLQDEI LCKAVERFKG KNWKKIAECF KDRTDVQCLH RWQKVLNPEL 60 VKGPWSKEED EIIIDLVNKY GPKKWSSIAQ HLPGRIGKQC RERWHNHLNP SINKEAWTQD 120 EELALIVAHE KYGNRWAELT KYLPGRSDNA IKNHWHSSVK KKLDSYKASG LLARLQSAPF 180 IGNPNQPIAS TSSRLQCSGD ENGPRGTEAE EVSQCNQESA NAGHFPSATE MSNVVFRTRE 240 ECRPNEESSV GKDYSPSEAS CSEPYYVSLD DVEFNEQKYS QEPGNFTNGD CQLNLSALAN 300 ISSLDFVREP SRLQNDCIAS SESQDMLISN DECCRLLFPE AMGDDCFSSG DNKGVNMVDL 360 SRCTSFNFQT SLPSAAPSAP SASDDRLLYT AEANQLVGSE DQQFICQTSA PSVPSAGDGS 420 LLFTAETNQL VGYEDQQFVS RAQDNFIYAN DLSGAACINQ IGCSEMQEPS DNVEETSKLV 480 PVNSFGCGSE TKQTCYPTDE KPNLHTKQEN TGSLCYEPPR FPSLDIPFLS CDLTQPGCDM 540 QQEFSPLGIR QLMMSSMNCL SPFRLWDSPS RNDSPDALLK SAAKTFIGTP SILKKRHRDL 600 LSPLSDKRID KKLEIDMTST LIKDFSRLEV MFDDIETPEA VFLSPSSIRK KNSGISVEDD 660 KENCGQTVKE EQIKEEKKSA ILDDKRSELD TGDGISQEKG TQRFPDVKSG MKNDVNVTAE 720 IVQQPSGVLA EHDMNNLLLH SPDLVGFKSD SDPSLSARTH KSPCSSIKSP YGQEKLRVAV 780 ASCVHSFNSS APGENSDVHA GKDAGFETCS IFGGTPFRRS VESPTTWKSP WLFNTFLSSP 840 KIDPEITIED FGYFMSPGNR SYDAIEWMKQ ISPIAREILE NETPKALPKD ESVNVRDRDQ 900 ENKVPHDQPG NHCQLASNAL LKVERRILDF SECETPGKVD NSKFSTISCS SPSSSSYLLK 960 GCR

Sequence ? help Back to Top

Protein Sequence Length: 963 aa Download sequence

MLKSIVLRSG INGLSLQDEI LCKAVERFKG KNWKKIAECF KDRTDVQCLH RWQKVLNPEL  60
VKGPWSKEED EIIIDLVNKY GPKKWSSIAQ HLPGRIGKQC RERWHNHLNP SINKEAWTQD  120
EELALIVAHE KYGNRWAELT KYLPGRSDNA IKNHWHSSVK KKLDSYKASG LLARLQSAPF  180
IGNPNQPIAS TSSRLQCSGD ENGPRGTEAE EVSQCNQESA NAGHFPSATE MSNVVFRTRE  240
ECRPNEESSV GKDYSPSEAS CSEPYYVSLD DVEFNEQKYS QEPGNFTNGD CQLNLSALAN  300
ISSLDFVREP SRLQNDCIAS SESQDMLISN DECCRLLFPE AMGDDCFSSG DNKGVNMVDL  360
SRCTSFNFQT SLPSAAPSAP SASDDRLLYT AEANQLVGSE DQQFICQTSA PSVPSAGDGS  420
LLFTAETNQL VGYEDQQFVS RAQDNFIYAN DLSGAACINQ IGCSEMQEPS DNVEETSKLV  480
PVNSFGCGSE TKQTCYPTDE KPNLHTKQEN TGSLCYEPPR FPSLDIPFLS CDLTQPGCDM  540
QQEFSPLGIR QLMMSSMNCL SPFRLWDSPS RNDSPDALLK SAAKTFIGTP SILKKRHRDL  600
LSPLSDKRID KKLEIDMTST LIKDFSRLEV MFDDIETPEA VFLSPSSIRK KNSGISVEDD  660
KENCGQTVKE EQIKEEKKSA ILDDKRSELD TGDGISQEKG TQRFPDVKSG MKNDVNVTAE  720
IVQQPSGVLA EHDMNNLLLH SPDLVGFKSD SDPSLSARTH KSPCSSIKSP YGQEKLRVAV  780
ASCVHSFNSS APGENSDVHA GKDAGFETCS IFGGTPFRRS VESPTTWKSP WLFNTFLSSP  840
KIDPEITIED FGYFMSPGNR SYDAIEWMKQ ISPIAREILE NETPKALPKD ESVNVRDRDQ  900
ENKVPHDQPG NHCQLASNAL LKVERRILDF SECETPGKVD NSKFSTISCS SPSSSSYLLK  960
GCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV97794