PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97135

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 320aa MW: 36049.3 Da PI: 7.3407

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97135	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	106.9	1.6e-33	19	113	1	95
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaC+++rrkC++dCvlapyfp e+++++ +vhk+FG sn++k+l++l e+er++a++s +eA ++++dPv+G +g ++kl +++l ++ a OIV97135 19 ACAACRHQRRKCKEDCVLAPYFPMEKTQQYLAVHKVFGFSNMTKILSNLVEQERKEAVESFQWEAMMWQQDPVQGPLGAYKKLCDMINNLLTQQA 113 7************************************************************************************9999887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MVRYNNIEGG EGSNANRHAC AACRHQRRKC KEDCVLAPYF PMEKTQQYLA VHKVFGFSNM 60 TKILSNLVEQ ERKEAVESFQ WEAMMWQQDP VQGPLGAYKK LCDMINNLLT QQAIQSFDSN 120 LMKTHDLLGF NNGGSNEAQT IAVSNNGVPP ITNNWGLNNF GQSSKTSYEK SLVSHSQVFR 180 NEVEESKVLR YVADPNALFQ RDSSLLQHNY IPSLASVATQ DITQVPYSNM AQPNQNRVLQ 240 YSNGNMVNKQ GGIMMRRGQG TEGNVENIYY DGHGVVNHVE NGVIEANSDH AMAQNRGRSQ 300 ITGFQHFLYQ LGHDRIKQDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	3e-23	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV97135