PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV97053
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 823aa    MW: 91772.9 Da    PI: 7.0646
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV97053genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.11.4e-22139240199
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
               f+k+lt sd++++g +++ +++a+e+       ++  + +++l+ +d++ ++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+v
  OIV97053 139 FCKTLTASDTSTHGGFSVLRRHADEClppldmtKQ--PPTQELVAKDLNANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELRV 235
               99****************************97433..34459************************************************..449999*** PP

               EEE-S CS
        B3  95 kvfrk 99 
               +v+r+
  OIV97053 236 GVRRA 240
               **996 PP
2Auxin_resp117.98.2e-39265347183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+st+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gtvvg++d+d+  Wp+SkWrsLk
    OIV97053 265 AWHAISTGTMFTVYYKPRTSPAEFIVPYNQYMDSLKNRYTIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDSKTWPDSKWRSLK 347
                 89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 823 aa     Download sequence    
MMRMTSSEIT MKGNGGGEGH NGNLSCIDAE AALYRELWYA CAGPLVTVPR ERELVFYFPQ  60
GHIEQVEAST NQVAEQQMPV YDLPSKILCR IMNVQLKAEP DTDEVFAQVT LLPESNQDEN  120
AVEKEPPPPP PARFHVHSFC KTLTASDTST HGGFSVLRRH ADECLPPLDM TKQPPTQELV  180
AKDLNANEWR FRHIFRGQPR RHLLQSGWSV FVSSKRLVAG DAFIFLRGEN GELRVGVRRA  240
MRQQGNVPSS VISSHSMNLG VLATAWHAIS TGTMFTVYYK PRTSPAEFIV PYNQYMDSLK  300
NRYTIGMRFK MRFEGEEAPE QRFTGTVVGI EDSDSKTWPD SKWRSLKVKW DETSNIPRPN  360
RVSPWKIEPT LAHSPLNPLP VPRAKRPRSN AVPSSPNSSA LPREALSKVS LHPLPTNGFP  420
RVLQGQEFST LKGKFEVSNE FDTVERSVAL PPAVADAKFD VPILRRHGSE NWMSMGRHEP  480
AYSDLLSGFG ASGDPSHQPL VDQICHVAYS ASKHSLDHEA KFHVHHPWPV MPSSLSLNLL  540
DSNSKGSAHV DTTCQARGNL RCRTFDEYPV FHHGHKVEHP HGNLIPPPSP TQHESLSSRE  600
IMSKPMSLKT SEAMILKDGD CKLFGISLIS SAIAPKPSLL QRNATSEPAG EMHLTSHQPQ  660
SSGNDQMSEH SKNSKPSDGP VVMGDHEKPK LLQAKPSCVS ARSCTKVHKK GIALGRSVDL  720
TKYCDYNGLI AELDRLFEFG GELMSPNMDW LIVYTDNEGD MMLVGDDPWQ EFCTMVHKIY  780
IYPKEEIQKM SPGTLCSNNE DNHSASECAE AKEVKSQLNQ MLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein