PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV96949 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 186aa MW: 20685.4 Da PI: 5.7829 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 145.1 | 2e-45 | 11 | 110 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC ++Cv+apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++el+++++e OIV96949 11 PCAACKFLRRKCMPECVFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAITFLQRQVQRLQKELDAANAE 110 7*********************************************************************************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MASSSCSYNS PCAACKFLRR KCMPECVFAP YFPPEEPQKF ANVHKIFGAS NVTKLLNELL 60 PQQREDAVNS LAYEAEARVR DPVYGCVGAI TFLQRQVQRL QKELDAANAE LLHYAYNEIS 120 PLPTSLAISP LTPLQQIPQR TQFGARIGNE GSGFYRQSPV TYSFPYSLPW NNDTSLEDIN 180 EGGGSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 9e-76 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV96949 |