PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96939

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 579aa MW: 62827.5 Da PI: 8.1909

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96939	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.6	1.3e-24	204	247	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e OIV96939 204 DPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVE 247 79***************************************997 PP
2	QLQ	52.4	1.6e-18	153	185	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT aQ+ +L++Q+++yKy++a+ P+Pp+Ll + OIV96939 153 PFTSAQWKELERQAMIYKYMMASIPIPPDLLIP 185 8*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MGEFGVSHKE PNKSSVSTTH TTTSSVVGLG LKKLQHTLEA FPSNKNNMMM LHHNHHHHPL 60 SQPFDNDLSG DGDVPVHTTY MSNLTNHMNF VSTTGSYSAL GAGAIDGAAS SVPVRTLQQQ 120 PFDISPYYTS GTTTLTYPAF KSSEVMAASL GFPFTSAQWK ELERQAMIYK YMMASIPIPP 180 DLLIPTVSRS TLNSGFNLRL SSNDPEPGRC RRTDGKKWRC SRDVAPNHKY CERHMHRGRP 240 RSRKPVEVHI NNNNNNNNQN QIKRARHDSN PFPASDVSVS ISNNTTTKKD GCASQFVSSG 300 ASNRYLDTSS LSLHHNFGVK TGNFDSVASV SSNKEPRGLE WMLNGDPISL GASDSEFQCL 360 MHNKVGNTEP QYLNSFGIYN SGVLDQQNRR SSMFLNALDF PMESLQSPKP RGYIDAWSIE 420 ESNGNTNNKS NAASIGKFSL DLSMGGGCVH EDIGTIDMGL GLMENGNNTK QNDTKTHLSN 480 WLTPSSSSSS WVASTTLGGP LAEVLRPSTI TNDAASNQSS PVITHAESSS NTLGTLVSSP 540 SGVLHKTIAS FSDSSSNSSP RVGSSRASNN SDIALLRFN

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MGEFGVSHKE PNKSSVSTTH TTTSSVVGLG LKKLQHTLEA FPSNKNNMMM LHHNHHHHPL  60
SQPFDNDLSG DGDVPVHTTY MSNLTNHMNF VSTTGSYSAL GAGAIDGAAS SVPVRTLQQQ  120
PFDISPYYTS GTTTLTYPAF KSSEVMAASL GFPFTSAQWK ELERQAMIYK YMMASIPIPP  180
DLLIPTVSRS TLNSGFNLRL SSNDPEPGRC RRTDGKKWRC SRDVAPNHKY CERHMHRGRP  240
RSRKPVEVHI NNNNNNNNQN QIKRARHDSN PFPASDVSVS ISNNTTTKKD GCASQFVSSG  300
ASNRYLDTSS LSLHHNFGVK TGNFDSVASV SSNKEPRGLE WMLNGDPISL GASDSEFQCL  360
MHNKVGNTEP QYLNSFGIYN SGVLDQQNRR SSMFLNALDF PMESLQSPKP RGYIDAWSIE  420
ESNGNTNNKS NAASIGKFSL DLSMGGGCVH EDIGTIDMGL GLMENGNNTK QNDTKTHLSN  480
WLTPSSSSSS WVASTTLGGP LAEVLRPSTI TNDAASNQSS PVITHAESSS NTLGTLVSSP  540
SGVLHKTIAS FSDSSSNSSP RVGSSRASNN SDIALLRFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	9e-39	GRF family protein

Link Out ? help Back to Top
Ensembl	OIV96939