PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV96880 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | WRKY | ||||||||
Protein Properties | Length: 169aa MW: 19581 Da PI: 6.2281 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 38.6 | 2.2e-12 | 4 | 46 | 20 | 59 |
S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 rsY+rC+ + gC++kk+v+r +e+p++ ++tY g H+++ OIV96880 4 ICRSYFRCSKKydqGCRAKKQVQRVQENPDMYHTTYIGIHTCK 46 57*******998899**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MPRICRSYFR CSKKYDQGCR AKKQVQRVQE NPDMYHTTYI GIHTCKDTLK DPQMITYSDT 60 LDSTLMNSNS DSKVPNEKDP SICSRIPVIK QEYHKQDMPS DLIDNLDSTL WSDLKDFEQY 120 KSVIVPSKMK SHNADNVYSC TDFQSLDNDF GVLSSPFSTD FHFVESHLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 8e-15 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV96880 |