PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96758

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 171aa MW: 19661.5 Da PI: 9.6149

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96758	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.8	7.7e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skR+ngilKKA+E+ vLCda+v++iif+s+gk++ey+s OIV96758 9 KRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFGSSGKMHEYIS 59 79***********************************************86 PP
2	K-box	82.9	7.3e-28	71	151	1	81
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelq 81 y+k+sgk+l+++k+e+l++e++++kke++++q e+Rhl+Ged++sL++keL+ Le++L+++l+ +R+kK + l e+ +el OIV96758 71 YHKASGKRLWDTKHENLSNEIDRVKKENDSMQIELRHLKGEDINSLNYKELMALEEALDNGLNGVREKKGKTLEEENRELN 151 7899***********************************************************************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MGRGKIEIKR IENSSNRQVT YSKRKNGILK KAKEITVLCD AQVSLIIFGS SGKMHEYISP 60 TTTLIDVLAK YHKASGKRLW DTKHENLSNE IDRVKKENDS MQIELRHLKG EDINSLNYKE 120 LMALEEALDN GLNGVREKKG KTLEEENREL NFLLQQHMAL EGARNMHGQW I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	2e-68	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIV96758