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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV96751 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 325aa MW: 36471.2 Da PI: 6.3604 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 57.3 | 3.5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+++++ +G+g+W++ ++ g+ R++k+c++rw +yl
OIV96751 14 KGPWTPEEDLKLINYIQTHGPGNWRALPKNAGLLRCGKSCRLRWTNYL 61
79******************************99************97 PP
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| 2 | Myb_DNA-binding | 51.9 | 1.7e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rgr++ eE+e +++++ +G++ W++Ia++++ gRt++++k++w+++
OIV96751 67 RGRFSFEEEEAIIQLHSVMGNK-WAAIAAKLP-GRTDNEIKNYWNTH 111
89********************.*********.************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 325 aa Download sequence |
MGRTPCCDKN GLKKGPWTPE EDLKLINYIQ THGPGNWRAL PKNAGLLRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEEAIIQ LHSVMGNKWA AIAAKLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSVLR SALCNPSLMM NMQGLLNSST QAPLVNPELL KLAATASLLS 180 MKIENPHLVS QNIQQQINDG NFQVQQNQGT LPQEFMNQFD QTLNQSTNVN GLSENMVNMS 240 NSSSLGNLIS QQNQVGLLEN SEFGQFLNNA NQNIGYESVL STPLSTPTSL NSSYVNSSTE 300 EERETYCSDI FKIEIPESLD ISDFL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G21440.1 | 6e-85 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV96751 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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