PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96276

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 1186aa MW: 132518 Da PI: 8.9218

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96276	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	8.1e-09	1132	1179	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 ++W++ E+++l+ av++ G g+Wk+I Rt+ ++k++w++ OIV96276 1132 KKWSALEEDKLKSAVNEIGEGNWKAILYSNLeifSERTPTDLKDKWRN 1179 68**********************9887789989*********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1186 aa Download sequence
MRLHNAMLVV TLVLCIVTIA CAQGRAPAVR LHKPHSVSGI QNVSYDGRSL LINGQRHLLF 60 SGSIHYTRST PEMWPDLLDK ARHGGLNVIQ TYVFWNAHES EKGKWNFEGN YDLVKFIKLI 120 QQKGMFATLR VGPFIQAEWN HGGLPYWLRE VPGIIFRSNN EPFKQHMEAY VTKIIKMMKD 180 EKLFASQGGP IILAQIENEY NHIQLAYDED GPSYVQWAAN MAVAQNIGVP WIMCKQKDAP 240 DPVINACNGR HCGDTFTGPN KPYKPALWTE NWTAQYRVFG DPTSQRSAED IAFSIARFFS 300 KDGILVNYYM YHGGTNFGRT SAAFTTTRYY DEAPLDEFGL QREPKWSHLR DAHRSLNLCK 360 KALLTGKSSV QRLNEFHEIR VYEKPQSDIC SAFITNNHTN EAATINFRGK NFFLPPHSIS 420 VLPDCKTVVY NTQQIASQHN TRNFRRSTLA NNHKWEVFSE TIPSLPVTQK LPAELYSLLK 480 DTTDYAWYST SFNLGAQDLP KNGAAPVLRI MSLGHSLLTF VNGEYIGSNH GTHEEKSFEF 540 QKPVNFKVGN NRITILASTV GLPDSGAYME HRYAGPKSIS ILGLTTGTIE LTANGWGHKV 600 GLKGEKQKIF SEEGSKRVKW RVAVGNAPAL SWFKTRFSTP EGRDPIAVRM NGMGKGMIWV 660 NGKSIGRHWM SFLSPIGKPT QSEYHIPRAF LNPSKEENLL VVLEEEIANP GQIEIVTVDR 720 DVVCSFITEN HPPNVNSFAS KDMKVHSVIE PEKPAAILKC SNFKKVVAVE FASYGNPSGF 780 CGSFALGNCN VAAAKNIVEQ ECLGKKSCKV SMESFSKNGN VCPETLMKKL IGLKSNVIVD 840 NSGDSRLKKS ILLKTLQSHV STVKITESTL EALEGIEELH RCDASTLTPS ITAAYCAVAL 900 ECTLKYLQSD LSVENNPLYV SAVQRIWRDR FGYLEGGGSL LFSSELKQWK IQLEASLVDN 960 KMVIELAELN TRRNAITKVK DYLANAWSDL GPSFIQLLTQ QSNKEQPHKG TDTGGPSIPI 1020 PTNPGATPPP NQHKLLASAS IQVQNETTAD IVVEEMDPPK SCTKLGTDGK ETDPPKTCGE 1080 VDSLPTRPQI QEETLVKDPP ESRFHLPSPK RKIVSPLKKY QPVNITKRRK PKKWSALEED 1140 KLKSAVNEIG EGNWKAILYS NLEIFSERTP TDLKDKWRNM ARCGGI

Sequence ? help Back to Top

Protein Sequence Length: 1186 aa Download sequence

MRLHNAMLVV TLVLCIVTIA CAQGRAPAVR LHKPHSVSGI QNVSYDGRSL LINGQRHLLF  60
SGSIHYTRST PEMWPDLLDK ARHGGLNVIQ TYVFWNAHES EKGKWNFEGN YDLVKFIKLI  120
QQKGMFATLR VGPFIQAEWN HGGLPYWLRE VPGIIFRSNN EPFKQHMEAY VTKIIKMMKD  180
EKLFASQGGP IILAQIENEY NHIQLAYDED GPSYVQWAAN MAVAQNIGVP WIMCKQKDAP  240
DPVINACNGR HCGDTFTGPN KPYKPALWTE NWTAQYRVFG DPTSQRSAED IAFSIARFFS  300
KDGILVNYYM YHGGTNFGRT SAAFTTTRYY DEAPLDEFGL QREPKWSHLR DAHRSLNLCK  360
KALLTGKSSV QRLNEFHEIR VYEKPQSDIC SAFITNNHTN EAATINFRGK NFFLPPHSIS  420
VLPDCKTVVY NTQQIASQHN TRNFRRSTLA NNHKWEVFSE TIPSLPVTQK LPAELYSLLK  480
DTTDYAWYST SFNLGAQDLP KNGAAPVLRI MSLGHSLLTF VNGEYIGSNH GTHEEKSFEF  540
QKPVNFKVGN NRITILASTV GLPDSGAYME HRYAGPKSIS ILGLTTGTIE LTANGWGHKV  600
GLKGEKQKIF SEEGSKRVKW RVAVGNAPAL SWFKTRFSTP EGRDPIAVRM NGMGKGMIWV  660
NGKSIGRHWM SFLSPIGKPT QSEYHIPRAF LNPSKEENLL VVLEEEIANP GQIEIVTVDR  720
DVVCSFITEN HPPNVNSFAS KDMKVHSVIE PEKPAAILKC SNFKKVVAVE FASYGNPSGF  780
CGSFALGNCN VAAAKNIVEQ ECLGKKSCKV SMESFSKNGN VCPETLMKKL IGLKSNVIVD  840
NSGDSRLKKS ILLKTLQSHV STVKITESTL EALEGIEELH RCDASTLTPS ITAAYCAVAL  900
ECTLKYLQSD LSVENNPLYV SAVQRIWRDR FGYLEGGGSL LFSSELKQWK IQLEASLVDN  960
KMVIELAELN TRRNAITKVK DYLANAWSDL GPSFIQLLTQ QSNKEQPHKG TDTGGPSIPI  1020
PTNPGATPPP NQHKLLASAS IQVQNETTAD IVVEEMDPPK SCTKLGTDGK ETDPPKTCGE  1080
VDSLPTRPQI QEETLVKDPP ESRFHLPSPK RKIVSPLKKY QPVNITKRRK PKKWSALEED  1140
KLKSAVNEIG EGNWKAILYS NLEIFSERTP TDLKDKWRNM ARCGGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1110	1130	KRKIVSPLKKYQPVNITKRRK
2	1110	1133	KRKIVSPLKKYQPVNITKRRKPKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	4e-21	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV96276