PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95950

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 311aa MW: 35728.9 Da PI: 6.6283

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95950	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.6e-18	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl OIV95950 27 RGPWTLDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 74 89********************************************97 PP
2	Myb_DNA-binding	51.3	2.7e-16	80	123	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l++++++++G++ W++Ia++++ gRt++++k++w++ OIV95950 80 RGNITLEEQLLILELHARWGNR-WSKIAQYLP-GRTDNEIKNYWRT 123 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MDVKGKVLNK SSTMIQSEEE EDMDLRRGPW TLDEDLALIN YIANHGEGRW NSLARSAGLK 60 RTGKSCRLRW LNYLRPDVRR GNITLEEQLL ILELHARWGN RWSKIAQYLP GRTDNEIKNY 120 WRTRVQKHAK QLKCDVNSKQ FKDAMRYLWM PRLMERIQAA ATATAATTTT DSSTLSITPN 180 VMTTNNNNNN FEVHSGGNMM LSPTIMNNNF GCSQIKQSYT PENSSTGTSS DSFGTHVSDL 240 THDYYSVPNL DYYQQAHQVN YIDCITSPSG LFSPEMDFQT MEPNTQWIQN GDISNNLWSF 300 ENMLQQLNDN M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	3e-85	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV95950