PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95754

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 391aa MW: 43708.9 Da PI: 7.4114

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95754	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.1	5.3e-37	38	181	3	130
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssasec.....eaesssssasnsssg 88 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+ ++sk++eWL+++a +i el+++ ++ ++ c + ++ ++++n+s++ OIV95754 38 GGKDRHSKVMTSKGLRDRRVRLSVTTAIEFYDLQDRLGYEQPSKAVEWLINAASDSISELPSLnttfpytpneLNDEKRPCfdevdGDTDNYNQNQNQSQN 138 78***********************************************************88887776652333345566655444455555555555 PP TCP 89 kaaksaakskksqksaasalnlak.esrakarararertrekm 130 +++a+s+ s++s+ s+l+l++ e r kar+rarer + + OIV95754 139 LCLSKSACSSTSETSKGSTLSLSRsEIRVKARERARERAGKVK 181 5566666999999999999*999********976654 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEEDDENQSH ACKFPRIGSK RNESHNCSRI VRVSRACGGK DRHSKVMTSK GLRDRRVRLS 60 VTTAIEFYDL QDRLGYEQPS KAVEWLINAA SDSISELPSL NTTFPYTPNE LNDEKRPCFD 120 EVDGDTDNYN QNQNQSQNLC LSKSACSSTS ETSKGSTLSL SRSEIRVKAR ERARERAGKV 180 KEKENESFHI VTNHHNHHNV TKNASFTELL TGGIENVATK TSASVCDESN LFNNKAKQWS 240 PMVMDYFNSG LTSRNVSPNQ DQLQHFSFIH DHNFIPCSQS SGSDYNLNFT ISPSLVGYNR 300 GTLQSNSQSH IMPHMQKFSS SHIDGSTNNL PFFIGGVSNS TSDASTMDTS INHHQQQQQQ 360 QLQFSTVFGG SLQLCYGDGS RNSDQKGKAK N

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEEDDENQSH ACKFPRIGSK RNESHNCSRI VRVSRACGGK DRHSKVMTSK GLRDRRVRLS  60
VTTAIEFYDL QDRLGYEQPS KAVEWLINAA SDSISELPSL NTTFPYTPNE LNDEKRPCFD  120
EVDGDTDNYN QNQNQSQNLC LSKSACSSTS ETSKGSTLSL SRSEIRVKAR ERARERAGKV  180
KEKENESFHI VTNHHNHHNV TKNASFTELL TGGIENVATK TSASVCDESN LFNNKAKQWS  240
PMVMDYFNSG LTSRNVSPNQ DQLQHFSFIH DHNFIPCSQS SGSDYNLNFT ISPSLVGYNR  300
GTLQSNSQSH IMPHMQKFSS SHIDGSTNNL PFFIGGVSNS TSDASTMDTS INHHQQQQQQ  360
QLQFSTVFGG SLQLCYGDGS RNSDQKGKAK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30210.2	7e-43	TCP family protein

Link Out ? help Back to Top
Ensembl	OIV95754