 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OIV95722 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
| Family | MYB | ||||||||
| Protein Properties | Length: 294aa MW: 33567.9 Da PI: 5.8788 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 45.1 | 2.3e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd++l++ + G +W+t+++ g+ R++k+c++rw +yl
OIV95722 14 KGPWSAEEDKKLINFILTNGQFCWRTVPKLAGLLRCGKSCRLRWTNYL 61
79******************99**********99************97 PP
| |||||||
| 2 | Myb_DNA-binding | 52.8 | 9e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+++E++ +d+++qlG++ W++Ia+ ++ gRt++++k++w+++
OIV95722 70 LSEDEEKMVIDLHAQLGNR-WSKIASNLP-GRTDNEIKNHWNTH 111
589****************.*********.************97 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 294 aa Download sequence |
MGRQPCCDKV GLKKGPWSAE EDKKLINFIL TNGQFCWRTV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEDEEKMVID LHAQLGNRWS KIASNLPGRT DNEIKNHWNT HIKKKLKKIG 120 IDPVTHKPLP NAVVQTQTQP HQPCQEQHQK LCLPVNQDPK FEPESDHDKE PETSFESSTL 180 TEAIEDKTIT PSFDSIMDEF CIDKVPIIES NKILVPHASS TSSKSSNFIE DLLLPDFELS 240 PNNENNNINS NVNNNRSMAL WDDDFINGWD FLVNDDGGDP RIIMDSKSWN YGLF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G16600.1 | 6e-89 | MYB family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIV95722 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|