PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95654

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 639aa MW: 71048.4 Da PI: 4.7936

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95654	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.6e-11	588	637	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 + rWT E+e l d+vk++G g+W++I + ++R++ ++k++w++ OIV95654 588 KRRWTSLEEETLRDGVKMFGEGSWAAIRSFYSnilENRSGVDLKDKWRNM 637 579*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MDPEISRWVL EFLLRSTVSD SLIAKTLTAL PLSGADSRLK KTILLRTLQS FHSNASITET 60 SLEILELIEE IDLNDAVPIT DSMRRAFCAV AVECTVKYLA ACPDDSAGNY LAAVRRIWRG 120 RVAKLESAGR RGGLFSEELV RWRDELEAAV WDTRVCERLV GLNSRTEALN EVNVYLKEAW 180 EILGPSFLDS VAAMAKAKGL HFDFGGESVG NRNGGLEVSA NVDGNDDDAN NHDNGNDNDD 240 ANNHDNDGDA SNHDDDGYDD GANNHDNGND NDGDASSHDN DGYDGGACHK EDKNLDKEDD 300 SEERVGAFVD LNHDLAAERD TEIQKGNLQH KRKHLAHTCP DSIGEFAYGG ELKRKRDEGL 360 KGFTKQRRDF DGGDRSEPDD GGVCCTEDVS VSGEKQQQEQ VEERVETSVD GNQELGGCDL 420 PAQGEKEIQK HNLKHRVKHT ALRRCCKGVK LSGTEEVEPA KSWGKCDYVP SSEVKKVRES 480 LKSSSLELQA LVKDPLPDAL QTSEVVRSKL AVKDINQNGD VDVPDPIVCK SIVPFQPNDA 540 NLVKQSFVRC SNNVRRPNLL ERKDTARTYQ WDDSLGNFSQ VAQPRKKKRR WTSLEEETLR 600 DGVKMFGEGS WAAIRSFYSN ILENRSGVDL KDKWRNMTR

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MDPEISRWVL EFLLRSTVSD SLIAKTLTAL PLSGADSRLK KTILLRTLQS FHSNASITET  60
SLEILELIEE IDLNDAVPIT DSMRRAFCAV AVECTVKYLA ACPDDSAGNY LAAVRRIWRG  120
RVAKLESAGR RGGLFSEELV RWRDELEAAV WDTRVCERLV GLNSRTEALN EVNVYLKEAW  180
EILGPSFLDS VAAMAKAKGL HFDFGGESVG NRNGGLEVSA NVDGNDDDAN NHDNGNDNDD  240
ANNHDNDGDA SNHDDDGYDD GANNHDNGND NDGDASSHDN DGYDGGACHK EDKNLDKEDD  300
SEERVGAFVD LNHDLAAERD TEIQKGNLQH KRKHLAHTCP DSIGEFAYGG ELKRKRDEGL  360
KGFTKQRRDF DGGDRSEPDD GGVCCTEDVS VSGEKQQQEQ VEERVETSVD GNQELGGCDL  420
PAQGEKEIQK HNLKHRVKHT ALRRCCKGVK LSGTEEVEPA KSWGKCDYVP SSEVKKVRES  480
LKSSSLELQA LVKDPLPDAL QTSEVVRSKL AVKDINQNGD VDVPDPIVCK SIVPFQPNDA  540
NLVKQSFVRC SNNVRRPNLL ERKDTARTYQ WDDSLGNFSQ VAQPRKKKRR WTSLEEETLR  600
DGVKMFGEGS WAAIRSFYSN ILENRSGVDL KDKWRNMTR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	586	590	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	1e-16	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV95654