PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95558

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 471aa MW: 53510.7 Da PI: 7.9141

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95558	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	148	194	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++vkq+G W+ Ia+++ gR +kqc++rw+++l OIV95558 148 KGQWTAEEDRKLLKLVKQHGVTKWSQIAEKLE-GRAGKQCRERWHNHL 194 799***************************.***********97 PP
2	Myb_DNA-binding	49.6	9.4e-16	200	242	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eE+ +lv+ +++ G++ W+ Ia+ ++ gRt++ +k++w+ OIV95558 200 KDSWSEEEERILVETHAKVGNR-WAEIAKIIP-GRTENAIKNHWN 242 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MKSMGGRIIL SGGRDAIPIL GNGNMKATIP SLFRSGPPLT AIDRFLWGQQ QQQQQPHNNV 60 ARNTHAIVFD DEFYKVACSG GGSTFRFVWP NYTQEGSFYD EIIANEEALN WENHFATTCQ 120 NENVLALRKN MKVVRRKPKN GSSMFLIKGQ WTAEEDRKLL KLVKQHGVTK WSQIAEKLEG 180 RAGKQCRERW HNHLRPDIKK DSWSEEEERI LVETHAKVGN RWAEIAKIIP GRTENAIKNH 240 WNATKRRQNS RRKNKRPATS NGKPQPTILQ DYIKHKTLTT PSTSTTETSE ETAAAAASQL 300 SLLLSQPSES VTTENNTLSP PFTEESHDDE LLFMQELFKE NNFQTQQHVN VAESVNHSKT 360 EGYYCQTNNN GNQVHTVTEF GFVNSNPNPN PNNNMVYDET LISRKTPTNY LDLYVSHLLN 420 GAASSSSSIF CDYGNKNLNT DLKLGDDQDF SEGKREMDLI EMVCSKSYNF Y

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MKSMGGRIIL SGGRDAIPIL GNGNMKATIP SLFRSGPPLT AIDRFLWGQQ QQQQQPHNNV  60
ARNTHAIVFD DEFYKVACSG GGSTFRFVWP NYTQEGSFYD EIIANEEALN WENHFATTCQ  120
NENVLALRKN MKVVRRKPKN GSSMFLIKGQ WTAEEDRKLL KLVKQHGVTK WSQIAEKLEG  180
RAGKQCRERW HNHLRPDIKK DSWSEEEERI LVETHAKVGN RWAEIAKIIP GRTENAIKNH  240
WNATKRRQNS RRKNKRPATS NGKPQPTILQ DYIKHKTLTT PSTSTTETSE ETAAAAASQL  300
SLLLSQPSES VTTENNTLSP PFTEESHDDE LLFMQELFKE NNFQTQQHVN VAESVNHSKT  360
EGYYCQTNNN GNQVHTVTEF GFVNSNPNPN PNNNMVYDET LISRKTPTNY LDLYVSHLLN  420
GAASSSSSIF CDYGNKNLNT DLKLGDDQDF SEGKREMDLI EMVCSKSYNF Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	256	KRRQNSRRKNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	3e-64	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV95558