PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV95393
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family CO-like
Protein Properties Length: 361aa    MW: 40420.1 Da    PI: 6.0171
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV95393genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box171.3e-05847538
  zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
               C+ +++  + l+C+ ++  lC +C  e H+       Ht
  OIV95393  8 PCDYCGHTIALLYCRADSAKLCFSCDREVHSTnqlfskHT 47
              7******99*********************6677777776 PP

2zf-B_box26.91e-085199541
  zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg............Htvvp 41
               C+ +++ ++++fC + ++ lC++C  e+H++            H+++p
  OIV95393 51 LCDICDDSPATIFCSTESSVLCQNCDWEQHNNnnnnnknsmsstHERRP 99
              6*****************************8878888888888887776 PP

3CCT60.55.4e-21317360144
       CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
               R+ allRYk+K+ktR++eK+irYesRK++AesR RvKGrF+k +
  OIV95393 317 RDSALLRYKQKKKTRRYEKHIRYESRKVRAESRIRVKGRFAKMK 360
               899**************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MSASCHRPCD YCGHTIALLY CRADSAKLCF SCDREVHSTN QLFSKHTRFL LCDICDDSPA  60
TIFCSTESSV LCQNCDWEQH NNNNNNNKNS MSSTHERRPL EGFNGCPCVN ELLGIVGFED  120
IEKKSLLSSD LESGVVGGDG YFGYEVEGVS DLFVWDTPSV VSLDDLISTS GSSHNYQAME  180
VPPLPKNRKA ACGMHKEEVL NQLSKLAKSE PLDLDTEQNV PSGNLSTGFE GGLEPNIFPS  240
FEWHRESSEH VNQVVPLPPD MSLSAYTEEV PVKHSTSAVW ETHTYGNNEG TPSHSLTNET  300
LPTTPKAVPC ELTSQERDSA LLRYKQKKKT RRYEKHIRYE SRKVRAESRI RVKGRFAKMK  360
D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326332QKKKTRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47890.11e-93CO-like family protein