PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV95393 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | CO-like | ||||||||
Protein Properties | Length: 361aa MW: 40420.1 Da PI: 6.0171 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17 | 1.3e-05 | 8 | 47 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ + l+C+ ++ lC +C e H+ Ht OIV95393 8 PCDYCGHTIALLYCRADSAKLCFSCDREVHSTnqlfskHT 47 7******99*********************6677777776 PP | |||||||
2 | zf-B_box | 26.9 | 1e-08 | 51 | 99 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg............Htvvp 41 C+ +++ ++++fC + ++ lC++C e+H++ H+++p OIV95393 51 LCDICDDSPATIFCSTESSVLCQNCDWEQHNNnnnnnknsmsstHERRP 99 6*****************************8878888888888887776 PP | |||||||
3 | CCT | 60.5 | 5.4e-21 | 317 | 360 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ allRYk+K+ktR++eK+irYesRK++AesR RvKGrF+k + OIV95393 317 RDSALLRYKQKKKTRRYEKHIRYESRKVRAESRIRVKGRFAKMK 360 899**************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MSASCHRPCD YCGHTIALLY CRADSAKLCF SCDREVHSTN QLFSKHTRFL LCDICDDSPA 60 TIFCSTESSV LCQNCDWEQH NNNNNNNKNS MSSTHERRPL EGFNGCPCVN ELLGIVGFED 120 IEKKSLLSSD LESGVVGGDG YFGYEVEGVS DLFVWDTPSV VSLDDLISTS GSSHNYQAME 180 VPPLPKNRKA ACGMHKEEVL NQLSKLAKSE PLDLDTEQNV PSGNLSTGFE GGLEPNIFPS 240 FEWHRESSEH VNQVVPLPPD MSLSAYTEEV PVKHSTSAVW ETHTYGNNEG TPSHSLTNET 300 LPTTPKAVPC ELTSQERDSA LLRYKQKKKT RRYEKHIRYE SRKVRAESRI RVKGRFAKMK 360 D |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 326 | 332 | QKKKTRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47890.1 | 1e-93 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV95393 |