PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95177

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 734aa MW: 80569 Da PI: 6.2163

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95177	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.4e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ OIV95177 24 RERWTDEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MDAYSSGEEV VVKTRKPYTI TKQRERWTDE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALLKG ISIGHALDIE IPPPRPKRKP SNPYPRKTNV GSPTINSRSD 120 QGTVASSHSK EALDLEKEPL PEKNDEDERP TTVKENKDDN CSKVFAVIQQ APCSSVSSAI 180 SASVLLRNSC ALREFIPSVK EVVTRDETEE SLVTVELGKR KLEINGGKHT QQASKFESSD 240 ATQAKSVQTD TTDGLNCALT SNGMQGNQNY PRHITVQVVE GNHESSTQNP SQDKLFRDSM 300 FQPMIGGVNG QPKLFTNSAP SNISENQSNT GESSIHQPFP PCPPSAQHNH DDYQTILQMS 360 STFSSVIVST LLQNPAAHAA ASFAATFWPY ANSETSVDSP MCSQGGIPSR QVGSPPSIAA 420 IAAATVGAAT AWWAAHGMLP LCAPLHTTFP CPPSSRTAIP SMNAGEAPSV TEQGEINLQN 480 PPLEDKMFNP EYSETQQAQQ HSLSSSPFET EESGDAKLNT SSKAINNEMN HAISEHLDTN 540 KTNGNKPVDR SSCGSNTTSS SEEADALEKD EKEKEEPGPE THNVNHLDPE TSNRLSCSSR 600 SIGYHTDYWK DVSDEGRLAF QALFSRQVLP QSFSPPKNTN YKDKADLESK KCSSNCEPLE 660 SKKCSPNCEP VQKTQPFVEN NNNDNNDEEG LLTIGLGHGR LKTRRTGFKP YKRCSVEANE 720 NNVGKSCNQG RKHF

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MDAYSSGEEV VVKTRKPYTI TKQRERWTDE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALLKG ISIGHALDIE IPPPRPKRKP SNPYPRKTNV GSPTINSRSD  120
QGTVASSHSK EALDLEKEPL PEKNDEDERP TTVKENKDDN CSKVFAVIQQ APCSSVSSAI  180
SASVLLRNSC ALREFIPSVK EVVTRDETEE SLVTVELGKR KLEINGGKHT QQASKFESSD  240
ATQAKSVQTD TTDGLNCALT SNGMQGNQNY PRHITVQVVE GNHESSTQNP SQDKLFRDSM  300
FQPMIGGVNG QPKLFTNSAP SNISENQSNT GESSIHQPFP PCPPSAQHNH DDYQTILQMS  360
STFSSVIVST LLQNPAAHAA ASFAATFWPY ANSETSVDSP MCSQGGIPSR QVGSPPSIAA  420
IAAATVGAAT AWWAAHGMLP LCAPLHTTFP CPPSSRTAIP SMNAGEAPSV TEQGEINLQN  480
PPLEDKMFNP EYSETQQAQQ HSLSSSPFET EESGDAKLNT SSKAINNEMN HAISEHLDTN  540
KTNGNKPVDR SSCGSNTTSS SEEADALEKD EKEKEEPGPE THNVNHLDPE TSNRLSCSSR  600
SIGYHTDYWK DVSDEGRLAF QALFSRQVLP QSFSPPKNTN YKDKADLESK KCSSNCEPLE  660
SKKCSPNCEP VQKTQPFVEN NNNDNNDEEG LLTIGLGHGR LKTRRTGFKP YKRCSVEANE  720
NNVGKSCNQG RKHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	7e-99	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIV95177