PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIV94930 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 315aa MW: 36204.6 Da PI: 5.1808 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4.2e-19 | 106 | 156 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+W+AeIrdp+ r r +lg++ taeeAa +++ + kl+g OIV94930 106 KKYRGVRQRP-WGKWAAEIRDPV----RrVRLWLGTYNTAEEAAMVYDNVAIKLRG 156 59********.**********63....45*************************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 315 aa Download sequence |
MDKYTRHVTH TKHVKEAEFL NNRSHPKVVR ITVTDTDATD SSSDEEHECS TRHRPPTKFI 60 NEIIFKPFKK DTVFSRKRTS VKPKSSAVGK PIIPASVQPE KFAAGKKYRG VRQRPWGKWA 120 AEIRDPVRRV RLWLGTYNTA EEAAMVYDNV AIKLRGPHAL TNFITPSPED KKPSTVTHSD 180 DISVEESYTQ NCFFSPTSVL QRCSLSEEAE SVTRDEVCEN SCVSQNLFET EKLNFMSSQI 240 PNTTVFDFQG SFMAHDIFNI EETIFLNDDC KSDMFLTTCE DLQLDLDLKG WYEKDDEFFE 300 EINDEMFDLD SLVAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G23750.1 | 6e-40 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIV94930 |