PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94896

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 481aa MW: 53670.9 Da PI: 6.4921

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94896	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.1	1.7e-12	176	215	8	48
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ed+ l+d+v +G + W+ Ia+ ++ gR +kqc++rw+++l OIV94896 176 EDDCLIDLVGNYGLKKWSYIAQFLP-GRIGKQCRERWHNHL 215 9**********************.***********97 PP
2	Myb_DNA-binding	47.5	4e-15	221	265	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + +WT+eE+ l+ + +++G++ W+ Ia+ ++ gR+++ +k++w++ OIV94896 221 KEAWTEEEEAVLAYYYQLYGSK-WAEIAKVLP-GRSDNAIKNHWNSM 265 579*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MRLERGQTWN LWVNAGTAMA RIWGRTGCNF DGSGRGRCQT GDCTGGLNCQ GWGVPPNTLA 60 EFALNQYANQ DFYDISLVDG FNIPMDFYPI NGGCHKLSCT ADINGQCPNE LRAPGGCNNP 120 CTVYKTNEYC CTNGQGSCGP TYFSRFFKDR CRDSYSYPQD DPTSTFTCPA GSNYKEDDCL 180 IDLVGNYGLK KWSYIAQFLP GRIGKQCRER WHNHLDPTIR KEAWTEEEEA VLAYYYQLYG 240 SKWAEIAKVL PGRSDNAIKN HWNSMKKKLD ASSPSGSDIS FATSGVKPAH VLAKKELQSF 300 NEMVSLEQSH LLKDSVNNSH TQLILQNTSA GEFCSEKSCL EGGTPSASIK YMALCNTPDM 360 YATNLDYFPL ATDVASEDIE SPKRQKVSSS ETKFLADGEY YNQIRKGSNN KINSMQHYAD 420 DISGFSPVSV LRSLAMTYEN MPSIIRKRSP RKTSSADYCD STQTPLSMIV STPESERVFN 480 Y

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MRLERGQTWN LWVNAGTAMA RIWGRTGCNF DGSGRGRCQT GDCTGGLNCQ GWGVPPNTLA  60
EFALNQYANQ DFYDISLVDG FNIPMDFYPI NGGCHKLSCT ADINGQCPNE LRAPGGCNNP  120
CTVYKTNEYC CTNGQGSCGP TYFSRFFKDR CRDSYSYPQD DPTSTFTCPA GSNYKEDDCL  180
IDLVGNYGLK KWSYIAQFLP GRIGKQCRER WHNHLDPTIR KEAWTEEEEA VLAYYYQLYG  240
SKWAEIAKVL PGRSDNAIKN HWNSMKKKLD ASSPSGSDIS FATSGVKPAH VLAKKELQSF  300
NEMVSLEQSH LLKDSVNNSH TQLILQNTSA GEFCSEKSCL EGGTPSASIK YMALCNTPDM  360
YATNLDYFPL ATDVASEDIE SPKRQKVSSS ETKFLADGEY YNQIRKGSNN KINSMQHYAD  420
DISGFSPVSV LRSLAMTYEN MPSIIRKRSP RKTSSADYCD STQTPLSMIV STPESERVFN  480
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	2e-42	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV94896