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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV94895 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | HSF | ||||||||
| Protein Properties | Length: 306aa MW: 34299.3 Da PI: 6.3209 | ||||||||
| Description | HSF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HSF_DNA-bind | 118.6 | 3.6e-37 | 17 | 108 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl+k+y++++d++ ++lisw+e+g++f+v+++ efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv ++ weF+h+ F++g++ ll++ik
OIV94895 17 FLTKTYQLVDDPSKNDLISWNEDGTTFIVWKPAEFARDLLPNYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFAHDCFRRGERGLLREIK 104
9*****************************************************************99.........******************** PP
XXXX CS
HSF_DNA-bind 99 rkks 102
r+k
OIV94895 105 RRKI 108
*985 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 306 aa Download sequence |
MEQTGESDLQ RFLPTPFLTK TYQLVDDPSK NDLISWNEDG TTFIVWKPAE FARDLLPNYF 60 KHNNFSSFVR QLNTYGFRKV VPDRWEFAHD CFRRGERGLL REIKRRKISP AAAIAANTVT 120 VAVAAPALAR TVSPTTSGEE QVLSANSCPN ITVHQSTTNC TNIPELLEEN ERLRKENVQM 180 SHELIQLKSL YNNIFGLMSN YASSRSTQFH SSISAAVPEG KSLDLMPPTK YATPFKAGDG 240 EVPKLFGVSI GMKRGHRTES EGETEKEYQT QLSHEADGGS DVKSEPHDGD NSGDQVKETR 300 WLELGK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G11660.1 | 9e-85 | HSF family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV94895 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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