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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV94816 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | SRS | ||||||||
| Protein Properties | Length: 302aa MW: 32706.8 Da PI: 7.5434 | ||||||||
| Description | SRS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF702 | 204 | 4.1e-63 | 100 | 238 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103
g++sCqdCGnqakkdC h+RCRtCCksrg+dC+thvkstWvpa+krrer qq+++++++ +++r+ ++ ++s+ + + ++s++ le +
OIV94816 100 GGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERLQQQQQQQHQL---------HSERD----HNPTTSRLRSNPTTSPSGLEHT 187
5789**********************************************88877643322.........22333....234455555566778889999* PP
DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
++P+ vss+a frcvrvss++d+ee++aYqtav+igGhvfkGiLydqG+++
OIV94816 188 NFPAMVSSPAEFRCVRVSSMEDSEEQYAYQTAVNIGGHVFKGILYDQGPDH 238
*************************************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 302 aa Download sequence |
MAGIFSLGGG SGGGGGGGGG RGNNTNNNQE NQQQTTDFSP QQEPLFWYNK SVEDVRGLEL 60 WQHHQQPQIP QVRPIFHQDL YSLGVGPSRG SDAVASSGSG GGISCQDCGN QAKKDCPHMR 120 CRTCCKSRGY DCQTHVKSTW VPASKRRERL QQQQQQQHQL HSERDHNPTT SRLRSNPTTS 180 PSGLEHTNFP AMVSSPAEFR CVRVSSMEDS EEQYAYQTAV NIGGHVFKGI LYDQGPDHST 240 SSYTGGESSS TRVLGSGGAQ SSNLIAAATT TGALVDPSFL YPPQLNTFMP PCGTQFFPHQ 300 RS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G51060.1 | 4e-55 | SRS family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV94816 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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