PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV94777 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 214aa MW: 24975.1 Da PI: 6.6372 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 55 | 109 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++++eq++ Le+ F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ OIV94777 55 KKRKLSDEQVNMLEQSFGNEHKLESERKDKLAMELGLDPRQVAVWFQNRRARWKN 109 56799************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 120.8 | 7e-39 | 55 | 146 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+ls+eqv++LE+sF +e+kLe+erK +la eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+a++a + e++ Le+ev +L+e+l+e OIV94777 55 KKRKLSDEQVNMLEQSFGNEHKLESERKDKLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHEATTLEKCLLETEVLKLKEQLSE 146 9****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MNHLNIEDHI MLTSQLYSAG PYTQIVPQQG EYKKPRRRRN KKCRGGESGA LDAHKKRKLS 60 DEQVNMLEQS FGNEHKLESE RKDKLAMELG LDPRQVAVWF QNRRARWKNK KLEEEYSTLK 120 KAHEATTLEK CLLETEVLKL KEQLSEAEKE IQILKHTDRV SSNSPSSSQQ SQSMEAVVDP 180 PFFGEFQVDG YDDDVFYVPE THYINGMEWI NLYI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 58 | RRRRNKKCRGGESGALDAHKKRK |
2 | 37 | 59 | RRRRNKKCRGGESGALDAHKKRK |
3 | 55 | 84 | KKRKLSDEQVNMLEQSFGNEHKLESERKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-63 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV94777 |