PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94730

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 490aa MW: 54269.1 Da PI: 6.9604

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94730	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.2e-17	139	188	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIV94730 139 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 188 78*****************......55**********************997 PP
2	AP2	43	1.2e-13	231	281	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OIV94730 231 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 281 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MWDLNDSPDQ RYDNKGKGVG SVSNSSSSAV VIEDDGSDEE LKKRSSKIFG FSVTHDGGGG 60 DDDESMDSDN LPVTQQFFPV EEESEVTVPS GDGGSSSNFP RAHWVGVKFC QSEGLGGGKS 120 VEMSQPMKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD 180 RAAIKFRGVE ADINFNIEDY EEDLKQMSNL TKEEFVHVLR RQSTGFPRGS SKYRGVTLHK 240 CGRWEARMGQ FLGKKYVYLG LFDTEVEAAR AYDKAAIKCN GKEAVTNFDP SIYDNELNSE 300 SSGTVADHNL DLSLGNSSSK HSNNQASGNH TPNVATYHTP KVHITQYFLD LNLLHICLNH 360 TFVFVAYIFI QLVNILPKLC GKSNMDGHGT HLQSPASNNE MQIHGPLSSS GEPHNFAHHL 420 HPPNFYFPSS SNGVRIESDL SLSMNNQQKW QSGPPLFVAT AAASSGFSPQ IRPSQAWVQK 480 NGFYNLMKPP

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MWDLNDSPDQ RYDNKGKGVG SVSNSSSSAV VIEDDGSDEE LKKRSSKIFG FSVTHDGGGG  60
DDDESMDSDN LPVTQQFFPV EEESEVTVPS GDGGSSSNFP RAHWVGVKFC QSEGLGGGKS  120
VEMSQPMKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD  180
RAAIKFRGVE ADINFNIEDY EEDLKQMSNL TKEEFVHVLR RQSTGFPRGS SKYRGVTLHK  240
CGRWEARMGQ FLGKKYVYLG LFDTEVEAAR AYDKAAIKCN GKEAVTNFDP SIYDNELNSE  300
SSGTVADHNL DLSLGNSSSK HSNNQASGNH TPNVATYHTP KVHITQYFLD LNLLHICLNH  360
TFVFVAYIFI QLVNILPKLC GKSNMDGHGT HLQSPASNNE MQIHGPLSSS GEPHNFAHHL  420
HPPNFYFPSS SNGVRIESDL SLSMNNQQKW QSGPPLFVAT AAASSGFSPQ IRPSQAWVQK  480
NGFYNLMKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-130	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIV94730