PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94592

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 357aa MW: 40823.4 Da PI: 6.2837

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94592	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.6	3.4e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W+t ++ g+ R++k+c++rw +yl OIV94592 14 KGPWTPEEDQKLVDYIQKHGYGNWRTLPKNAGLERCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	57.3	3.7e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T eE+e +++++ lG++ W+tIa++++ gRt++++k++w+++ OIV94592 67 RGRFTFEEEEAIIQLHSILGNK-WSTIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ KHGYGNWRTL PKNAGLERCG KSCRLRWTNY 60 LRPDIKRGRF TFEEEEAIIQ LHSILGNKWS TIASRLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILS SSFYDSSQMN IQRLLGMQPM VNPELLKLAS SIFSSHQGQY 180 PTNMECAQNG DQENQHCSTQ FQNQIQNFEH TPCVSLPLTH SQLVESNMNQ YPSDFNDFSS 240 QQHSHMSDWH SNEIASRTAI NEDYVPQLPS YNYYGSDYLT NIMDPLVSET STFYSNNSNQ 300 NFSFTSVLST PTSSPKPLNS NSTYINGSST EDERESYVSS SILGYEIRNI LGVNEIM

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ KHGYGNWRTL PKNAGLERCG KSCRLRWTNY  60
LRPDIKRGRF TFEEEEAIIQ LHSILGNKWS TIASRLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSILS SSFYDSSQMN IQRLLGMQPM VNPELLKLAS SIFSSHQGQY  180
PTNMECAQNG DQENQHCSTQ FQNQIQNFEH TPCVSLPLTH SQLVESNMNQ YPSDFNDFSS  240
QQHSHMSDWH SNEIASRTAI NEDYVPQLPS YNYYGSDYLT NIMDPLVSET STFYSNNSNQ  300
NFSFTSVLST PTSSPKPLNS NSTYINGSST EDERESYVSS SILGYEIRNI LGVNEIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-102	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV94592