PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV94487 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25304.6 Da PI: 5.9295 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.4 | 2.1e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+eyss OIV94487 9 KKIDNTTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 53.1 | 1.4e-18 | 92 | 172 | 19 | 99 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++L ke+ + +e+R++ GedL+ L+++eLqqLe+ Le +l ++ +kK e ++++i +lq k l een++L+++++ OIV94487 92 SNYTRLSKEVAEKSHELRQMRGEDLHGLDIEELQQLERFLEAGLGRVIEKKGEKIMNEITDLQTKGMHLMEENERLKRQVA 172 67899999999999****************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAREKIQIKK IDNTTARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYSSS 60 SMKEILERHN LHSKNLAKME QPSLELQLVE NSNYTRLSKE VAEKSHELRQ MRGEDLHGLD 120 IEELQQLERF LEAGLGRVIE KKGEKIMNEI TDLQTKGMHL MEENERLKRQ VANITNGQMH 180 ECENIVGDEA GQSSAESATN FGTGPPHDSD SSDTSLKLGL PYQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-112 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV94487 |