PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94481

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 502aa MW: 55319.7 Da PI: 7.1067

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94481	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.6	2.3e-11	216	272	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + rk + g ++ +e+Aa+a++ a++k++g OIV94481 216 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEEKAARAYDLAALKYWG 272 57*****************4444.2344336655.779999************98 PP
2	AP2	49.6	9.8e-16	317	366	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OIV94481 317 YRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 366 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MARATNSNWL SFSLSPMEML RSSEPQFIQY DAASAPSQYF LDNYYANGWG NSKSQMLYGV 60 QMDQNDSNKE QAPPQAVPKL EDFFGDSSSM MRYSDSQTET PDSSLTHSYE HGGSSTYFSG 120 GDHQDLKAIA GFQAFATNSG SEVDDSGSIG KSQPTCNEFG THSIESPASA LAFSGRCGNA 180 TDTFSLGIPE SSEKAVAVVT SVTPKKIADT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR 240 REGQARKGRQ GGYDKEEKAA RAYDLAALKY WGPAATTNFP VSTYSKEVEE MKHVTKQEFI 300 ASLRRKSSGF SRGASMYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE EEAAEAYDIA 360 AIKFRGSNAV TNFEMNRYDV EAIMNSSLPV GGAAKRLKLS LESEQKQQSL GNSQQQQQHP 420 QCGNMNSSIN FSAIHQPTLS IPRGIPYDSS TAYYHHNLFH QYQHPTNGGA PESGVTSINT 480 SGLNTVPATA APEFFTWTHQ SY

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MARATNSNWL SFSLSPMEML RSSEPQFIQY DAASAPSQYF LDNYYANGWG NSKSQMLYGV  60
QMDQNDSNKE QAPPQAVPKL EDFFGDSSSM MRYSDSQTET PDSSLTHSYE HGGSSTYFSG  120
GDHQDLKAIA GFQAFATNSG SEVDDSGSIG KSQPTCNEFG THSIESPASA LAFSGRCGNA  180
TDTFSLGIPE SSEKAVAVVT SVTPKKIADT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR  240
REGQARKGRQ GGYDKEEKAA RAYDLAALKY WGPAATTNFP VSTYSKEVEE MKHVTKQEFI  300
ASLRRKSSGF SRGASMYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE EEAAEAYDIA  360
AIKFRGSNAV TNFEMNRYDV EAIMNSSLPV GGAAKRLKLS LESEQKQQSL GNSQQQQQHP  420
QCGNMNSSIN FSAIHQPTLS IPRGIPYDSS TAYYHHNLFH QYQHPTNGGA PESGVTSINT  480
SGLNTVPATA APEFFTWTHQ SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-171	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIV94481