PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94232

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 426aa MW: 48040.9 Da PI: 6.3221

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94232	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l +++++G g+W++ +++ g+ R++k+c++rw +yl OIV94232 14 KGPWTTEEDQKLMAYIEEYGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	48.5	2.1e-15	67	116	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ +W++Ia+ ++ +Rt++++k++w+++l OIV94232 67 RGKFSLQEEQTIIQLHALLGNRlalQWSAIAAQLP-KRTDNEIKNYWNTHL 116 89*******************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MGRSPCCEKV GLKKGPWTTE EDQKLMAYIE EYGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRLA LQWSAIAAQL PKRTDNEIKN YWNTHLKKRL 120 TKLGIDPTTH KLKADAYGGS GDCQSKNASH LSHMAQWENA RLEAETRLVR ESKLQPGSCS 180 NTQPTCLVLN KITARPSVPP CLDILKAWQN SWSKPQQQIT SQTTTKANMD NKMYQHSMYA 240 MMHSTDDDNL ESPTSTLNFP GTMLPITTTT TILNENLLPL TTTDNNTTTN MESESWRHLS 300 LTNHNNNHPD EELLGEKRTI MENNTLSNLQ DDDIMVAVEA FRTSSGYDNI VVPPVLFTTM 360 EELSSNDAMV YDSSNDNLGA EHEENLAIMN GYGSIYNVNL EENNNKHYWN SILNLVNDSL 420 SGSSVF

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MGRSPCCEKV GLKKGPWTTE EDQKLMAYIE EYGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRLA LQWSAIAAQL PKRTDNEIKN YWNTHLKKRL  120
TKLGIDPTTH KLKADAYGGS GDCQSKNASH LSHMAQWENA RLEAETRLVR ESKLQPGSCS  180
NTQPTCLVLN KITARPSVPP CLDILKAWQN SWSKPQQQIT SQTTTKANMD NKMYQHSMYA  240
MMHSTDDDNL ESPTSTLNFP GTMLPITTTT TILNENLLPL TTTDNNTTTN MESESWRHLS  300
LTNHNNNHPD EELLGEKRTI MENNTLSNLQ DDDIMVAVEA FRTSSGYDNI VVPPVLFTTM  360
EELSSNDAMV YDSSNDNLGA EHEENLAIMN GYGSIYNVNL EENNNKHYWN SILNLVNDSL  420
SGSSVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	2e-95	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV94232