PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93866

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 503aa MW: 55684.3 Da PI: 7.4606

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93866	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	171	220	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIV93866 171 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 220 78*****************......55**********************997 PP
2	AP2	42.9	1.2e-13	257	307	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OIV93866 257 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 307 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MWDLNDSPDQ RRKGEEESEE ACSSLKTSMD CDDDDNNNNN KGKGVGSASN SSSSAVVIED 60 GSEEEEEGEK MMMKKRSSKI FGFSVTHESD DSMDSDNNLP QPLMTTRQFF PVEEADTAVT 120 SGGGCGGVSS FPRAHWVGVK FCQSERVGAG KSVEVSQPMK KSRRGPRSRS SQYRGVTFYR 180 RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG VEADINFNIE DYEDDLKQAK 240 FVHVLRRQST GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EVEAARAYDK 300 AAIKCNGKEA VTNFDPSIYD NELNSGTTTT ADHNLDLSLG NSSSKTSNHD QHMSSESNWR 360 NEGSINKPKL VSILPKPYSN RSNIETHGGM GVQGQAHLHS SPSNELQRYG PYKSLGESQM 420 LHNFAHLQPP NFHFPSSSNG RRGLIGSDLS LSVSDQQQQW QSGPPHYIAT AAASSGFPPQ 480 IIRPSSQGWL QKNGFHTLMR PSS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MWDLNDSPDQ RRKGEEESEE ACSSLKTSMD CDDDDNNNNN KGKGVGSASN SSSSAVVIED  60
GSEEEEEGEK MMMKKRSSKI FGFSVTHESD DSMDSDNNLP QPLMTTRQFF PVEEADTAVT  120
SGGGCGGVSS FPRAHWVGVK FCQSERVGAG KSVEVSQPMK KSRRGPRSRS SQYRGVTFYR  180
RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG VEADINFNIE DYEDDLKQAK  240
FVHVLRRQST GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EVEAARAYDK  300
AAIKCNGKEA VTNFDPSIYD NELNSGTTTT ADHNLDLSLG NSSSKTSNHD QHMSSESNWR  360
NEGSINKPKL VSILPKPYSN RSNIETHGGM GVQGQAHLHS SPSNELQRYG PYKSLGESQM  420
LHNFAHLQPP NFHFPSSSNG RRGLIGSDLS LSVSDQQQQW QSGPPHYIAT AAASSGFPPQ  480
IIRPSSQGWL QKNGFHTLMR PSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-121	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIV93866