PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93487

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 233aa MW: 25564 Da PI: 8.4946

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93487	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	98.3	7.7e-31	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C+vlr++C+++C+l+p++ p++q +++ +v+k+FG++ +++++++++e++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e++l OIV93487 2 SCNGCRVLRKGCSESCILRPCLqwienPEAQGHATVFVAKFFGRACLMSFISNVSETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVL 102 6***********************************************************************************************99887 PP DUF260 97 l 97 + OIV93487 103 R 103 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MSCNGCRVLR KGCSESCILR PCLQWIENPE AQGHATVFVA KFFGRACLMS FISNVSETQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVET VLRGGTLTPL PTRLGMDAPT 120 PGMDEASETE VTYTEIWTNR NQNSNYRFMS SRSNVTSTGG GGKRKSPEAA TVAIDLDLRL 180 TPIFLQKASD YKSRPENRRQ CSPSMTSEES VTTVASSDSG NRRGERKVLN LFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	3e-76	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV93487