PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93376

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 530aa MW: 58619.8 Da PI: 5.8847

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93376	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.6	5.2e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+++TplWR+gp ++ LCnaCG ++r kg+ OIV93376 7 CYHCGVISTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MGKEGPCYHC GVISTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDNDNQR 60 VSRVKILPLN KNKEVKLLKR KVGQTDYAVS GGFAPDYDQG FRKVVDEDTS NRSSSGSVIS 120 NTESCAQFGG TDASDFTGPA QSVVWEAMVP AKKRTCGGRP KHSSVEKLTK DLCTILHEQQ 180 SYLSATSEED LLFESETPMV SVEIGHGSIL IRHPSTIARE EESEASSLSV DNKQCLMSEA 240 YSCSGGIPVY SNYNGKVMQA EELKRHVFLY TDKSKIEKLQ DLGDHDSPLR LIDLNDVVNY 300 EEFIKNLTNE EQQQLLKYLP VADTSEVPNS LTMMFSSSQF KENLTYFQQL LREGVFDISL 360 LGGKPGDCET LKRLALSNLS KSKWVEHYNF LKSCKDRAGK SIAMGSPGMA SSDVVHVKRL 420 RDSENPDLPE LTKTMTTPKS VTVKAGCEGK EVAEDGSCFN AKSLFALPRD HSSHMMDSLN 480 FEYENSDQDL LLDVPSNGFF PQAELLHPTA SFDAQASTSS SSIYSHVAHY

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MGKEGPCYHC GVISTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDNDNQR  60
VSRVKILPLN KNKEVKLLKR KVGQTDYAVS GGFAPDYDQG FRKVVDEDTS NRSSSGSVIS  120
NTESCAQFGG TDASDFTGPA QSVVWEAMVP AKKRTCGGRP KHSSVEKLTK DLCTILHEQQ  180
SYLSATSEED LLFESETPMV SVEIGHGSIL IRHPSTIARE EESEASSLSV DNKQCLMSEA  240
YSCSGGIPVY SNYNGKVMQA EELKRHVFLY TDKSKIEKLQ DLGDHDSPLR LIDLNDVVNY  300
EEFIKNLTNE EQQQLLKYLP VADTSEVPNS LTMMFSSSQF KENLTYFQQL LREGVFDISL  360
LGGKPGDCET LKRLALSNLS KSKWVEHYNF LKSCKDRAGK SIAMGSPGMA SSDVVHVKRL  420
RDSENPDLPE LTKTMTTPKS VTVKAGCEGK EVAEDGSCFN AKSLFALPRD HSSHMMDSLN  480
FEYENSDQDL LLDVPSNGFF PQAELLHPTA SFDAQASTSS SSIYSHVAHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-143	GATA family protein

Link Out ? help Back to Top
Ensembl	OIV93376