PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV93330 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 177aa MW: 19438.8 Da PI: 7.5337 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 144.8 | 2.4e-45 | 15 | 114 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C++dCv+apyfp+++p+kfanvhk+FGasn+ k+l++lpe++r da+ss+vyeA+ar++dPvyG+vg i++lqqq++ l+++la++++e OIV93330 15 PCAACKLLRRRCSQDCVFAPYFPSHEPHKFANVHKVFGASNINKMLQELPEHQRGDAVSSMVYEANARVKDPVYGCVGAISSLQQQINVLQTQLAVTQAE 114 7**********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MKESGRKQSG GASSPCAACK LLRRRCSQDC VFAPYFPSHE PHKFANVHKV FGASNINKML 60 QELPEHQRGD AVSSMVYEAN ARVKDPVYGC VGAISSLQQQ INVLQTQLAV TQAEVVHLRV 120 THNASSSSLW NNNAGHNSPT NSESPSSNIM DSQAKYFFEM DMVVVDHASY GDSMWSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 2e-71 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV93330 |