PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV93197
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LSD
Protein Properties Length: 139aa    MW: 15264.7 Da    PI: 8.2664
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV93197genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD126.88.7e-095275124
   zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdt 24
              Cg+Cr lL+YP G ++V Ca+C t
  OIV93197 52 CGSCRRLLAYPGGFKHVTCACCGT 75
              **********************87 PP
2zf-LSD1352.4e-1190112123
   zf-LSD1   1 CggCrtlLsYPrGApsVRCalCd 23 
               CggC +lL+YP+GAp+VRC +C 
  OIV93197  90 CGGCAVLLMYPYGAPRVRCCSCR 112
               **********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MIQTQEVKMR EKQEDDDGPP PGWQQPIHTT TPSLPTPPPP RPSGDNMGQL VCGSCRRLLA  60
YPGGFKHVTC ACCGTENLVL QPHQVGQVKC GGCAVLLMYP YGAPRVRCCS CRFETEIGDH  120
NKRPPLSEQL RKPTPPKGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21610.14e-34LSD family protein