PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV93071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | YABBY | ||||||||
Protein Properties | Length: 215aa MW: 24089.4 Da PI: 5.116 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 189.6 | 1.6e-58 | 6 | 161 | 2 | 165 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 ++f+ ++q+Cy+qC+fC+til+vsvP +s+++vvtvrCGhCtsllsvn++kas +lla+ s+l+ ++ + ee+++++ ++++++ + s OIV93071 6 HLFDLPDQICYIQCGFCTTILMVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASfvplHLLASLSNLE--------PKECSPEEDMNKTLNNSNASMMTYS- 97 7899**********************************************99866666666666633........3333344444444444433333322. PP YABBY 99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165 + +e++ +p v++PPekrqr Psaynrfikeei+r+ka+ Pd++h+eafs+aaknWa P+ OIV93071 98 ---DCEEEDVIPINNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAEHPDMAHKEAFSTAAKNWANSPP 161 ...35566777777779**********************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MSTMNHLFDL PDQICYIQCG FCTTILMVSV PCSSMSMVVT VRCGHCTSLL SVNMMKASFV 60 PLHLLASLSN LEPKECSPEE DMNKTLNNSN ASMMTYSDCE EEDVIPINNV VNKPPEKRQR 120 TPSAYNRFIK EEIKRLKAEH PDMAHKEAFS TAAKNWANSP PTQCKGDEES CSQTEPLLDL 180 DSHLDPNDAE VNEEGQGFRG RKVPRNSILG RMPFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 1e-65 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV93071 |