PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV93031
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family AP2
Protein Properties Length: 509aa    MW: 55942.3 Da    PI: 6.6276
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV93031genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.62.4e-11221277155
       AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV++++++gr++A+++d  +       rk  + g ++ +e+Aa+a++ a++k++g
  OIV93031 221 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEEKAARAYDLAALKYWG 277
               57*******************4444.2344336655.779999**************98 PP
2AP250.55e-16320371155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  OIV93031 320 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 371
               57****************988532...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    
MEMLRSSQPQ FIQYDTASAT TPSHYFLDNN YANGWGNQKS QVLYGVQMEQ NDCNKGQAPP  60
QSMAELPSSL NNPPPQAVPK LEDFFADSSS SMMRYSDSQT ETQDSSLTHM GHICEHGGSA  120
AYFGGNDHQD LKAIAGFQAF STNSGSEVDD SGSIGKSQPT CNEFGTHSIE SSAHELAFSV  180
NCGGANGTLS LGVAQSSEKA IVAADSDSTK KIADTFGQRT SIYRGVTRHR WTGRYEAHLW  240
DNSCRREGQA RKGRQGGYDK EEKAARAYDL AALKYWGPTA TTNFPISNYS KEVEEMQHVT  300
KQEFIASLRR KSSGFSRGAS IYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFATEEEAAE  360
AYDIAAIKFR GANAVTNFEM NRYDVEAIMN SSLPVGGAAK RLKLSLESEQ KQQSLSNAQQ  420
HQHQQQPHCG NMNNSIDFSA IHQPIASIPY GVPYDSSTEY YHHNLFHHFY PNANAGTAES  480
VVTSTGANGL NALPASAAPE FYIWPHQSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.21e-159AP2 family protein