PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92992

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 342aa MW: 38696.2 Da PI: 6.9437

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92992	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.2	5.1e-20	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l d+++++G g+W+t a++ g++R++k+c++rw +yl OIV92992 14 KGPWTPEEDEKLSDYINKHGQGSWRTLAKRAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55	1.9e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+ l+++++ lG++ W++Ia +++ gRt++++k++w++ OIV92992 67 RGKFTEEEERLIINLHSVLGNK-WSKIAGHLP-GRTDNEIKNFWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRPPCCDEI IVKKGPWTPE EDEKLSDYIN KHGQGSWRTL AKRAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TEEEERLIIN LHSVLGNKWS KIAGHLPGRT DNEIKNFWNT NIRKKLLKMG 120 IDPETHKPRT DFNHIMNLAQ LIGMSNFGNP MSAWSNPLGF HADVTQLAKL QQLQNLLQII 180 NNNNSFVNMG NPSFSGNPSL NPLDAFLNGT NIIQTQEPAF SRGQEYANPG LFSQTHSDSS 240 KSWTDVEGGS TSHQEFDYNK VSSNTSLENQ AQTPLPALVA FSPKMETFNQ KDNGYEKAQA 300 PIQSPSNTFF NDWEEFLDNE RSDSCWKEIL DLTSSSTSPI SW

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRPPCCDEI IVKKGPWTPE EDEKLSDYIN KHGQGSWRTL AKRAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF TEEEERLIIN LHSVLGNKWS KIAGHLPGRT DNEIKNFWNT NIRKKLLKMG  120
IDPETHKPRT DFNHIMNLAQ LIGMSNFGNP MSAWSNPLGF HADVTQLAKL QQLQNLLQII  180
NNNNSFVNMG NPSFSGNPSL NPLDAFLNGT NIIQTQEPAF SRGQEYANPG LFSQTHSDSS  240
KSWTDVEGGS TSHQEFDYNK VSSNTSLENQ AQTPLPALVA FSPKMETFNQ KDNGYEKAQA  300
PIQSPSNTFF NDWEEFLDNE RSDSCWKEIL DLTSSSTSPI SW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17785.1	6e-84	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV92992