PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92889

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 316aa MW: 35112.5 Da PI: 7.7316

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92889	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.4	1.1e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC+++Cv+apyfp ++p++fa+vhk+FGasnv kll++l+ +r+da++sl+yeAear+rdPvyG+vg+i+ lq++l+q + el +k+e OIV92889 7 PCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELSAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLKQIQGELTNAKKE 106 7*********************************************************************************************999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQRFAYVH KVFGASNVAK LLNELSAAQR 60 DDAVKSLAYE AEARLRDPVY GCVGLISVLQ HRLKQIQGEL TNAKKELATY IGPQALQGIP 120 PAAVFQHLHA AAANPFGPSV FASMPSTHGG QMVMRDPQPS PQQMFGDPQL AAAVAAREQR 180 DMLRGFEHQQ QQLQQQQHQQ EFLRFNSGGF DLGTVPDDGF CQHVSPSAPV SQNLIGLSPS 240 LALGSFENHF HHMQQQHQGE PHANNAHVHS HHIPLEAQLL LTPRQEKQAQ QQTQQPQLSH 300 HHQQQHLDRK ERGLPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	3e-68	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV92889