PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92848

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 439aa MW: 48421.7 Da PI: 6.9846

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92848	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	93.1	3.3e-29	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C+vlr++C+++C+l+p++ p++q +++ +++k+FG++ ++++++++pe +r+++++sl++eA+ r+ +Pv+Gavg++++++++++++++e++l OIV92848 2 SCNGCRVLRKGCSESCILRPCLqwidtPEAQGHATIFIAKFFGRACLMSFISNVPEIQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCKAAVETVL 102 6***********************************************************************************************99887 PP DUF260 97 l 97 + OIV92848 103 R 103 6 PP
2	DUF260	58.1	2.5e-18	236	310	23	97
DUF260 23 paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 p++q +++ +++k+FG++ ++++++++pe +r+++++sl++eA+ r+ +Pv+Gavg++++++++++++++e++l+ OIV92848 236 PEAQGHATIFIAKFFGRACLMSFISNVPEIQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCKAAVETVLR 310 889999***************************************************************998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MSCNGCRVLR KGCSESCILR PCLQWIDTPE AQGHATIFIA KFFGRACLMS FISNVPEIQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCKAAVET VLRGGTLSPM PEFLAIDAPT 120 PTSDDASEGE VTCNDMWRLR DPNSNFRFTS SSSKVSSSGK RKRSEEIDDL NLRLTPSFLQ 180 NSQAYICRRD IRRPGSPSMN SEESVTTTAC LDSGLGDRYA HGDDRKVLNL FWIDTPEAQG 240 HATIFIAKFF GRACLMSFIS NVPEIQRPAL FQSLLFEACG RTVNPVNGAV GLLWTGNWHV 300 CKAAVETVLR GGTLSPMPEF LAIDAPTPTS DDASEGEVTC NDMWRLRDPN SNFRFTSSSS 360 KVSSSGKRKR SEEIDDLNLR LTPSFLQNSQ AYICRRDIRR PGSPSMNSEE SVTTTACLDS 420 GLGDRYAHGD DRKVLNLFV

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MSCNGCRVLR KGCSESCILR PCLQWIDTPE AQGHATIFIA KFFGRACLMS FISNVPEIQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCKAAVET VLRGGTLSPM PEFLAIDAPT  120
PTSDDASEGE VTCNDMWRLR DPNSNFRFTS SSSKVSSSGK RKRSEEIDDL NLRLTPSFLQ  180
NSQAYICRRD IRRPGSPSMN SEESVTTTAC LDSGLGDRYA HGDDRKVLNL FWIDTPEAQG  240
HATIFIAKFF GRACLMSFIS NVPEIQRPAL FQSLLFEACG RTVNPVNGAV GLLWTGNWHV  300
CKAAVETVLR GGTLSPMPEF LAIDAPTPTS DDASEGEVTC NDMWRLRDPN SNFRFTSSSS  360
KVSSSGKRKR SEEIDDLNLR LTPSFLQNSQ AYICRRDIRR PGSPSMNSEE SVTTTACLDS  420
GLGDRYAHGD DRKVLNLFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	1e-77	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV92848