PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92793

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 542aa MW: 60162.5 Da PI: 6.6701

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92793	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	37.3	3.9e-12	9	37	7	35
GATA 7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35 t TplWR+gp ++ LCnaCG ++r kg+ OIV92793 9 TGTPLWRNGPPEKPVLCNACGSRWRTKGT 37 78******88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MYEYLSISTG TPLWRNGPPE KPVLCNACGS RWRTKGTLAN YIPLHARAEG ADYEDQRVSR 60 VKSISLNKNK EMKSLKRKLS NDNVVFGGLA PDYNQGFRKA LDEDTSNRSS SGSAISNSES 120 CAQFGGMDAS DLTGPAQPVV WDTVVPSKKR TCVGHPKHSS VEKLTKDLCT ILQEQQSCFS 180 ASSEGELLFE SETPMVSVEI GHGSILIRHP SYIAREEESE ASSLSVDNKQ CTMNEAYSYP 240 GAVLMRNDSN SITFSSHRVE KVGSTAGQGM QQEQLKRHAF SCWDKSQLER VQILGNHDSP 300 LSLIDLNDVV NYEEFLKNLT KEEQQQLLKF LPVVDAVKLP DSLKFMFDSS QFKENLTYFQ 360 QLLAEGVFDI TLSGAKQEDC KTLKRQALSN LSKSKWVEHY YFLKKCKSRT GKSVNLGSNG 420 TLSTNVVNVK RSRDYRNQNF PELNTTMRSP KRVIANAGCE GKEVVEDGSY FSPKSLFALP 480 PDASSLLLDS LNFVDESSDQ DLLLEVPSNN SFPQAELLPP NLSFGAQAST SSSSVYSNLL 540 HR

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MYEYLSISTG TPLWRNGPPE KPVLCNACGS RWRTKGTLAN YIPLHARAEG ADYEDQRVSR  60
VKSISLNKNK EMKSLKRKLS NDNVVFGGLA PDYNQGFRKA LDEDTSNRSS SGSAISNSES  120
CAQFGGMDAS DLTGPAQPVV WDTVVPSKKR TCVGHPKHSS VEKLTKDLCT ILQEQQSCFS  180
ASSEGELLFE SETPMVSVEI GHGSILIRHP SYIAREEESE ASSLSVDNKQ CTMNEAYSYP  240
GAVLMRNDSN SITFSSHRVE KVGSTAGQGM QQEQLKRHAF SCWDKSQLER VQILGNHDSP  300
LSLIDLNDVV NYEEFLKNLT KEEQQQLLKF LPVVDAVKLP DSLKFMFDSS QFKENLTYFQ  360
QLLAEGVFDI TLSGAKQEDC KTLKRQALSN LSKSKWVEHY YFLKKCKSRT GKSVNLGSNG  420
TLSTNVVNVK RSRDYRNQNF PELNTTMRSP KRVIANAGCE GKEVVEDGSY FSPKSLFALP  480
PDASSLLLDS LNFVDESSDQ DLLLEVPSNN SFPQAELLPP NLSFGAQAST SSSSVYSNLL  540
HR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-141	GATA family protein

Link Out ? help Back to Top
Ensembl	OIV92793