PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV92511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 366aa MW: 41584.2 Da PI: 4.3699 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l+ +++ G ++W++ ++ g+ R++k+c++rw +yl OIV92511 16 RGPWSPEEDLKLIAFIQKNGHDNWRSLPKQSGLLRCGKSCRLRWINYL 63 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.3e-15 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+e +++++k +G++ W++Ia++++ gRt++++k+ w+++l OIV92511 69 RGNFTIQEEEAIIRLHKDFGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MGKGRAPCCD KTQVKRGPWS PEEDLKLIAF IQKNGHDNWR SLPKQSGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTIQEEEAI IRLHKDFGNK WSKIASCLPG RTDNEIKNVW NTHLKKRLSI 120 QSSESSTDES KLESSITSSS SSLSESLSSN DAPNLAAKTI PSNELNEQET LETMNDKIEQ 180 HSEKQISNEV ISIIEDPKEL TTSLSFVESN ILNSNHIVAF TPEQQLCSPL TNLEPYDADN 240 NNTLQEVDKP NHLNEIPWDL DDDIWKMVDN FVSMQSNEVQ LEGVPSNQIS NPIEESVQDV 300 ETMKWFHEFD NVFGLVGETN ESNKDGYLPK NYSSELGVDP QTFDLDVMES TESELDLSYI 360 QLWLMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 2e-80 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV92511 |