PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV91897

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

FAR1

Protein Properties

Length: 707aa MW: 81293.6 Da PI: 5.438

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91897	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.3e-22	98	181	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn+YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH++ OIV91897 98 DYYNSYAKETGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEAN-----SHRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSF 181 69**************************************98887.....999******************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MTDDTMCSLN DKGLSLSPNL DIAIHVGSPN GEQLLEVENQ DNGLENDCDQ LFEIDGSELE 60 GGRDETTVAN SHSRESQGKD YLPPVVGMEF DTYDDAYDYY NSYAKETGFA IRVKSSWTKR 120 NSKEKRGAVL CCNCEGFKTV KEANSHRKET RTGCLAMIRL RLVESNRWRV DEVKLEHNHS 180 FDLERAQNSK SHKRIDGGAK RKSEPTVDVE VRTIKLYRMP VVDASGYGSS NSNEGGTGSN 240 IIFSQSLKLK NGDAELISNY MCRSQLMNPN FFYVMDLNDD GQLRNIFWID SRSRAAYGYF 300 GDVVAFDSTC MSNNYEIPLV AFVGVNHHGQ SVLLGCGLLA DETYETYVWL FRAWLTCMSG 360 RPPQTFITNQ CKAMQSAIAD VFPRAHHRIC LSQVVQSILG CLVQFQEYVA FQTGLNKVIY 420 NSKTVDEFER DWDDLTQQFG IRNHEKLQTW HEEREHWAPV YSKDTFFAGI SDYEKGECVV 480 PFFKGHVHQQ TSLKEFFEIY ELVMQKKHKI EALDDLESRD SSPLLKTRYY YELQLSKLYT 540 NAIFRKFQDE VVMMSSCFSI TEIQTSGSIV TYMVKEGQGE EIVQDVTHFE VMYDKAGAEV 600 RCVCSCFNFK GYLCRHALCI LNYNGVEEIP CQYILSRWRK DFTRFYVPQL SSDSVDITNP 660 VQCFDHLYKR AMQVVEEGMV SQHHYMLAWQ TFKESLNKIR LLEDKIE

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MTDDTMCSLN DKGLSLSPNL DIAIHVGSPN GEQLLEVENQ DNGLENDCDQ LFEIDGSELE  60
GGRDETTVAN SHSRESQGKD YLPPVVGMEF DTYDDAYDYY NSYAKETGFA IRVKSSWTKR  120
NSKEKRGAVL CCNCEGFKTV KEANSHRKET RTGCLAMIRL RLVESNRWRV DEVKLEHNHS  180
FDLERAQNSK SHKRIDGGAK RKSEPTVDVE VRTIKLYRMP VVDASGYGSS NSNEGGTGSN  240
IIFSQSLKLK NGDAELISNY MCRSQLMNPN FFYVMDLNDD GQLRNIFWID SRSRAAYGYF  300
GDVVAFDSTC MSNNYEIPLV AFVGVNHHGQ SVLLGCGLLA DETYETYVWL FRAWLTCMSG  360
RPPQTFITNQ CKAMQSAIAD VFPRAHHRIC LSQVVQSILG CLVQFQEYVA FQTGLNKVIY  420
NSKTVDEFER DWDDLTQQFG IRNHEKLQTW HEEREHWAPV YSKDTFFAGI SDYEKGECVV  480
PFFKGHVHQQ TSLKEFFEIY ELVMQKKHKI EALDDLESRD SSPLLKTRYY YELQLSKLYT  540
NAIFRKFQDE VVMMSSCFSI TEIQTSGSIV TYMVKEGQGE EIVQDVTHFE VMYDKAGAEV  600
RCVCSCFNFK GYLCRHALCI LNYNGVEEIP CQYILSRWRK DFTRFYVPQL SSDSVDITNP  660
VQCFDHLYKR AMQVVEEGMV SQHHYMLAWQ TFKESLNKIR LLEDKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein

Link Out ? help Back to Top
Ensembl	OIV91897