PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV91388 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 201aa MW: 22007.1 Da PI: 4.5642 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 137.6 | 4.4e-43 | 47 | 146 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++reda+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la++++e OIV91388 47 PCAACKILRRRCVDKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQREDAVSSMVYEANARIRDPVYGCAGAICQLQKQISELQAQLAKAQAE 146 7**********************************************************************************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MLSNYSNSPP SSSSSPPSLS HSLSPSQSPP PPSAMPPPPP PIVVVSPCAA CKILRRRCVD 60 KCVLAPYFPP TDPLKFTIAH RVFGASNIIK FLQELPESQR EDAVSSMVYE ANARIRDPVY 120 GCAGAICQLQ KQISELQAQL AKAQAEVVNM QCQQANLVAL ICMEMTQSQD QNMLQPQPND 180 DDMNCFLDDT DFASAWDPLW T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 2e-67 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV91388 |