PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV91121 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | HB-PHD | ||||||||
Protein Properties | Length: 1245aa MW: 138960 Da PI: 4.5897 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 42 | 1.6e-13 | 864 | 910 | 10 | 56 |
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++L + F++n+yp+++++e LA++lgLt rqV WF N R + OIV91121 864 AVVQRLYKSFKENQYPDRNTKETLAQELGLTIRQVDKWFGNSRWSFR 910 56899**************************************8766 PP | |||||||
2 | PHD | 37.8 | 4.2e-13 | 517 | 572 | 1 | 51 |
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C++ +++++lCdg C++ fH+ Cl+++l +e++p+g wlC+ C++k OIV91121 517 FCAKCQSkeLSMDNDIILCDGaCDRGFHQLCLDPPLLTENIPSGdeGWLCPGCNCK 572 699****66556********66*********************9*9*******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1245 aa Download sequence |
MTSPTGNLTN HNEGTGEQMH NLDSGMEQSG LSEKTPQMGS ECSGSEKKVL GTALNNPLID 60 EKSNHVSDIL AENPVIQLPA PPQHDLEKSR QTGEGLCLQQ STSEQVPVHL SNDKSENKCQ 120 PFSQNVQHEL VQMSDAVTGF LVEDQVQSIS AQVPIHLSDD NSENKSQPFS QDVDNAFEEM 180 NNTATDFLVE DQTQSISAQV PDHLSDDKLK NTSQPLPQNV QNEFEEMKIA VTGSLVEDQT 240 LYIPAQVPIN LSNDESENKC QSFSQNELVE KSDAVTAILV EDQSQCIIGE VPVHLPNDKS 300 ENKSQLLSQD VQNELVQKSD AETGVIVDNQ TQTQANMSYV DPSFGDFAKS TTPARLRHKG 360 KGNSKLLKKK YMLRSIGSSD RSLRSRTQEK PKAPESSSTL VDVNNDGVKR KKRKKKSRRD 420 EGKIDEFSRI KAHLRYFLNR VSYEQSLIDA YSGEGWKGYS MEKLKPEKEL QRAKSAILRR 480 KSQIRDLFQN LDSLCAEGRL PESLFDSEGE IDSEDIFCAK CQSKELSMDN DIILCDGACD 540 RGFHQLCLDP PLLTENIPSG DEGWLCPGCN CKDDCLDLVN DSLGTRLALS DTWERVFPEA 600 AAGNSEDHDF ELPSDDSSDD YNPDVSQDEE VEGGESSSDE SQYASASEKL EDSHHEDPYL 660 GLPSEDSEDD DYNPNAPDRD NKVTEESSSS DFTSDSEDLA AIRKDNKSPG QGEDITSASL 720 DDFENSKNSS KQKCKVGKRP SLTDELSSLK ESDPGQEGCA HVSGKRNVER LDYKRLYDET 780 YKSDTSDDDE DWTATTGRKK KASGELTSVS PDGKVSNNSR PNPRRNLHQN RVVNTNNSPA 840 KSPEGSGKSS KPRFSASKKR LGEAVVQRLY KSFKENQYPD RNTKETLAQE LGLTIRQVDK 900 WFGNSRWSFR HSSTSAGGNA SRQATDTMAE NKGALGGEER DGELVSQEGN GEKSKTPSTR 960 KRKYMSEPQA SEIPTDVEIA GTVTPANAQE MQKVEIDEKD LKAAGAEVFF DGGRRGVRIH 1020 GWLIETRRNS ILNSSTVQQW EQKLETTHLP EMEALPPVEV PAAVKWKFRT KPSMQVILDY 1080 DYTFTTPYCE SGTIEIDKEL NGGEFSEENR NIHWEECKEQ IDVATLASKE PILFYDEVVL 1140 YEDELADNGV SLLSVKVRVM PSSWFLLLRF WLRVDGVLIR LRETRMHCVF GGSTKPTILR 1200 ETCWRESSCK GHPFDSDVYT DDPSIISQRL PIIMQRTQKL VIPQL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 409 | 415 | KRKKRKK |
2 | 410 | 416 | KRKKRKK |
3 | 411 | 415 | KKRKK |
4 | 411 | 419 | KKRKKKSRR |
5 | 413 | 420 | RKKKSRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 1e-92 | HB-PHD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV91121 |